RetrogeneDB ID: | retro_ttru_881 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_47:92545..93316(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PRDX3 | ||
Ensembl ID: | ENSTTRG00000010878 | ||
Aliases: | None | ||
Description: | peroxiredoxin 3 [Source:HGNC Symbol;Acc:9354] |
Percent Identity: | 96.11 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAAVAGRLLRTSLVRQVSAIPWGISASAALRPAASRRTCLTNALSSGSAQAKFAFSTSSSCHAPAVTQHA |
MAAVAGRL..TSLVRQVSAIPWGISASAALRPAASRRTCLTNAL.SGSAQAKFAFSTSSSCHAPAVTQH. | |
Retrocopy | MAAVAGRLFWTSLVRQVSAIPWGISASAALRPAASRRTCLTNALWSGSAQAKFAFSTSSSCHAPAVTQHV |
Parental | PDFKGTAVVNGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKANEFHDVNCEVVAVSVDSHFT |
PDFKGTAVVNGEFKEISLDD.KGKYLVLFFYPLDFTFVCP.EIIAFSDKANEFHDVNCEVVAVSVDSHFT | |
Retrocopy | PDFKGTAVVNGEFKEISLDDSKGKYLVLFFYPLDFTFVCPKEIIAFSDKANEFHDVNCEVVAVSVDSHFT |
Parental | HLAWINTPRKNGGLGHMHIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGIIKHLSVNDLPVGRSV |
HLAW.NTPRKNGGLGHMHI.LLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNG.IKHLSVNDLPVGRSV | |
Retrocopy | HLAWTNTPRKNGGLGHMHITLLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSV |
Parental | EETLRLVKAFQFVETHGEVCPANWTPDSPTIKPHPTASKEYFEKVNQ |
EETLRLVKAFQFVET.GEVCPANWTPDSPTIKPHPTASKEYFEKVNQ | |
Retrocopy | EETLRLVKAFQFVETYGEVCPANWTPDSPTIKPHPTASKEYFEKVNQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |