Parental gene:

PRDX3, ENSPTRG00000002992

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:10:118611081..118621996(-)


>ENSPTRG00000002992
ATGGCGGCTGCTGTAGGACGGTTGCTCCGAGCGTCGGTTGCCCGACATGTGAGTGCCATTCCTTGGGGCATTTCTGCCAC
TGCAGCCCTCAGGCCTGCTGCATGTGGAAGAACGAGCTTGACAAATTTATTGTGTTCTGGTTCCAGTCAAGCAAAATTAT
TCAGCACCAGTTCCTCATGCCATGCACCTGCTGTCACCCAGCATGCACCCTATTTTAAGGGTACAGCCGTTGTCAATGGA
GAGTTCAAAGACCTAAGCCTTGATGACTTTAAGGGGAAATATTTGGTGCTTTTCTTCTATCCTTTGGATTTCACCTTTGT
GTGTCCTACAGAAATTGTTGCTTTTAGTGACAAAGCTAACGAATTTCACGACGTGAACTGTGAAGTTGTCGCAGTCTCAG
TGGATTCCCACTTTAGCCATCTTGCCTGGATAAATACACCAAGAAAGAATGGTGGTTTGGGCCACATGAACATCGCACTC
TTGTCAGACTTAACTAAGCAGATTTCCCGAGACTACGGTGTGCTGTTAGAAGGTTCTGGTCTTGCACTAAGAGGTCTCTT
CATAATTGACCCCAATGGAGTCATCAAGCACTTAAGCGTCAACGATCTCCCAGTGGGCCGAAGCGTGGAAGAAACCCTCC
GCTTGGTGAAGGCGTTCCAGTATGTAGAAACACATGGGGAAGTCTGCCCAGCGAACTGGACACCGGATTCTCCTACGATC
AAGCCAAGTCCAGCTGCTTCCAAAGAGTACTTTCAGAAGGTAAATCAGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 31 .85 RPM
SRP007412_cerebellum 7 .03 RPM
SRP007412_heart 37 .13 RPM
SRP007412_kidney 65 .35 RPM
SRP007412_liver 25 .60 RPM
SRP007412_testis 3 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000008731 ortholog_one2many 1 retrogene
Canis familiaris ENSCAFG00000012109 ortholog_many2many 3 retrogenes
Callithrix jacchus ENSCJAG00000019636 ortholog_one2many 3 retrogenes
Ciona savignyi ENSCSAVG00000001209 ortholog_one2many 1 retrogene
Dasypus novemcinctus ENSDNOG00000001359 ortholog_one2many 3 retrogenes
Equus caballus ENSECAG00000017026 ortholog_one2many 1 retrogene
Erinaceus europaeus ENSEEUG00000009299 ortholog_one2many 1 retrogene
Homo sapiens ENSG00000165672 ortholog_one2many 3 retrogenes
Gorilla gorilla ENSGGOG00000026364 ortholog_one2many 1 retrogene
Macropus eugenii ENSMEUG00000007732 ortholog_one2many 3 retrogenes
Microcebus murinus ENSMICG00000007627 ortholog_one2many 1 retrogene
Myotis lucifugus ENSMLUG00000012871 ortholog_one2many 3 retrogenes
Macaca mulatta ENSMMUG00000008294 ortholog_one2many 2 retrogenes
Monodelphis domestica ENSMODG00000009286 ortholog_one2many 1 retrogene
Mustela putorius furo ENSMPUG00000003074 ortholog_one2many 1 retrogene
Mus musculus ENSMUSG00000024997 possible_ortholog 1 retrogene
Nomascus leucogenys ENSNLEG00000016698 ortholog_one2many 3 retrogenes
Oryctolagus cuniculus ENSOCUG00000017334 ortholog_many2many 2 retrogenes
Pongo abelii ENSPPYG00000002700 ortholog_one2many 1 retrogene
Pan troglodytes ENSPTRG00000000675 within_species_paralog 1 retrogene
Pan troglodytes ENSPTRG00000010541 within_species_paralog 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000002537 ortholog_one2many 2 retrogenes
Tupaia belangeri ENSTBEG00000011064 ortholog_one2many 5 retrogenes
Tursiops truncatus ENSTTRG00000010878 ortholog_one2many 2 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_29 98.83 100.00
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Download FASTA sequences of all ENSPTRG00000002992 retrocopies