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Species belonging to selected taxon:
Lactuca perennis
,
Lactuca saligna
,
Lactuca sativa
,
Lactuca serriola
,
Lactuca virosa
ABOUT THIS RECORD
ID:
MNEST046706
species:
Lactuca sativa
miRNA family:
MIR156
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Lactuca sativa
Lactuca
Lactucinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCAC
miRNA*
GCTCACCCTCTGTCTGTC
mismatches:
2
bulges:
1
View larger
pre-miRNA
TGACAGAAGAGAGTGAGCAC
CCATGGTCTTTCTCGCAAATAGTGCGCTTTCATGTGCTTGAAGCTATGCGT
GCTCACCCTCTGTCTGTC
dot-bracket secondary structure
.((((((((((.((((((((
.((((((..(((..(((....(((......))).)))..))))))))).))
)))))).)))).))))))
SIMILARITIES
miRBase
ghr-MIR156b
:
0.00000002
PMRD
ghr-miR156b
:
0.00000002
microPC
miR156
:
2e-45
UniProt
no hits
RFAM
mir-156: 0.000001
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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