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Species belonging to selected taxon:
Actinidia chinensis
,
Actinidia deliciosa
,
Actinidia eriantha
,
Antirrhinum majus
,
Barnadesia spinosa
,
Cichorium intybus
,
Coffea canephora
,
Fraxinus excelsior
,
Gerbera hybrid cultivar
,
Guizotia abyssinica
,
Helianthus argophyllus
,
Helianthus ciliaris
,
Helianthus exilis
,
Helianthus paradoxus
,
Helianthus petiolaris
,
Helianthus tuberosus
,
Ipomoea batatas
,
Lactuca perennis
,
Lactuca saligna
,
Lactuca sativa
,
Lactuca serriola
,
Lactuca virosa
,
Mimulus guttatus
,
Mimulus guttatus var. nasutus
,
Mimulus lewisii
,
Nicotiana benthamiana
,
Nicotiana langsdorffii x Nicotiana sanderae
,
Nicotiana tabacum
,
Ocimum basilicum
,
Panax ginseng
,
Parthenium argentatum
,
Petunia axillaris subsp. axillaris
,
Salvia miltiorrhiza
,
Solanum habrochaites
,
Solanum lycopersicum
,
Solanum melongena
,
Solanum pennellii
,
Solanum torvum
,
Striga hermonthica
,
Taraxacum kok-saghyz
,
Taraxacum officinale
,
Triphysaria pusilla
,
Triphysaria versicolor
,
Zinnia violacea
,
Capsicum annuum
,
Carthamus tinctorius
,
Catharanthus roseus
,
Centaurea maculosa
,
Centaurea solstitialis
,
Cichorium endivia
,
Artemisia annua
,
Helianthus annuus
,
Solanum tuberosum
,
Ipomoea nil
ABOUT THIS RECORD
ID:
MNEST046706
species:
Lactuca sativa
miRNA family:
MIR156
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Lactuca sativa
Lactuca
Lactucinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCAC
miRNA*
GCTCACCCTCTGTCTGTC
mismatches:
2
bulges:
1
View larger
pre-miRNA
TGACAGAAGAGAGTGAGCAC
CCATGGTCTTTCTCGCAAATAGTGCGCTTTCATGTGCTTGAAGCTATGCGT
GCTCACCCTCTGTCTGTC
dot-bracket secondary structure
.((((((((((.((((((((
.((((((..(((..(((....(((......))).)))..))))))))).))
)))))).)))).))))))
SIMILARITIES
miRBase
ghr-MIR156b
:
0.00000002
PMRD
ghr-miR156b
:
0.00000002
microPC
miR156
:
2e-45
UniProt
no hits
RFAM
mir-156: 0.000001
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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