Parental gene:

RPL34, ENSAMEG00000001758

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192504.1:756746..759911(-)


>ENSAMEG00000001758
ATGGTTCAGCGTTTGACCTACCGTCGTAGGCTGTCCTACAATACAGCCTCTAACAAAACTAGGCTGTCCCGAACCCCTGG
TAATAGAATCGTTTACCTTTATACCAAGAAGGTTGGGAAAGCACCAAAATCTGCATGTGGTGTGTGCCCAGGCCGACTTC
GAGGAGTTCGTGCTGTGAGACCTAAAGTCCTTATGAGGTTGTCTAAAACGAAAAAACACGTCAGCAGGGCCTATGGTGGT
TCCATGTGTGCTAAGTGTGTTCGTGACAGGATCAAGCGTGCTTTCCTTATTGAGGAGCAGAAAATCGTTGTGAAAGTGTT
GAAGGCACAAGCACAGAGTCAGAAAGCTAAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014226 ortholog_one2one 13 retrogenes
retro_btau_1017, retro_btau_1141, retro_btau_1280, retro_btau_1303, retro_btau_1372, retro_btau_1476, retro_btau_1738, retro_btau_288, retro_btau_404, retro_btau_465, retro_btau_628, retro_btau_712, retro_btau_904,
Cavia porcellus ENSCPOG00000000802 ortholog_one2one 6 retrogenes
retro_cpor_139, retro_cpor_1494, retro_cpor_402, retro_cpor_485, retro_cpor_694, retro_cpor_732,
Dasypus novemcinctus ENSDNOG00000011179 ortholog_one2one 26 retrogenes
retro_dnov_1172, retro_dnov_1775, retro_dnov_2020, retro_dnov_2025, retro_dnov_2079, retro_dnov_2127, retro_dnov_2137, retro_dnov_2275, retro_dnov_2385, retro_dnov_2501, retro_dnov_252, retro_dnov_262, retro_dnov_2627, retro_dnov_2651, retro_dnov_325, retro_dnov_339, retro_dnov_430, retro_dnov_553, retro_dnov_565, retro_dnov_59, retro_dnov_606, retro_dnov_635, retro_dnov_658, retro_dnov_862, retro_dnov_88, retro_dnov_978,
Gorilla gorilla ENSGGOG00000007650 ortholog_one2one 32 retrogenes
retro_ggor_1097, retro_ggor_1236, retro_ggor_1401, retro_ggor_1471, retro_ggor_1604, retro_ggor_1657, retro_ggor_1878, retro_ggor_2123, retro_ggor_2249, retro_ggor_226, retro_ggor_2262, retro_ggor_2336, retro_ggor_2397, retro_ggor_2494, retro_ggor_2723, retro_ggor_2744, retro_ggor_2884, retro_ggor_3042, retro_ggor_308, retro_ggor_327, retro_ggor_462, retro_ggor_479, retro_ggor_561, retro_ggor_607, retro_ggor_638, retro_ggor_680, retro_ggor_696, retro_ggor_747, retro_ggor_760, retro_ggor_781, retro_ggor_975, retro_ggor_995,
Gadus morhua ENSGMOG00000009982 ortholog_one2one 1 retrogene
retro_gmor_31,
Loxodonta africana ENSLAFG00000032615 ortholog_one2one 6 retrogenes
retro_lafr_1039, retro_lafr_1232, retro_lafr_182, retro_lafr_298, retro_lafr_306, retro_lafr_733,
Macropus eugenii ENSMEUG00000009361 ortholog_one2one 3 retrogenes
retro_meug_1012, retro_meug_1754, retro_meug_1775,
Macaca mulatta ENSMMUG00000011901 ortholog_one2many 1 retrogene
retro_mmul_162,
Monodelphis domestica ENSMODG00000020601 ortholog_one2one 3 retrogenes
retro_mdom_1690, retro_mdom_774, retro_mdom_836,
Mustela putorius furo ENSMPUG00000008873 ortholog_one2one 17 retrogenes
retro_mputfur_1028, retro_mputfur_1095, retro_mputfur_1130, retro_mputfur_1170, retro_mputfur_12, retro_mputfur_1242, retro_mputfur_1305, retro_mputfur_1480, retro_mputfur_1501, retro_mputfur_360, retro_mputfur_378, retro_mputfur_475, retro_mputfur_517, retro_mputfur_557, retro_mputfur_562, retro_mputfur_852, retro_mputfur_923,
Pongo abelii ENSPPYG00000014988 possible_ortholog 18 retrogenes
retro_pabe_1171, retro_pabe_1351, retro_pabe_1609, retro_pabe_1630, retro_pabe_1859, retro_pabe_2338, retro_pabe_2560, retro_pabe_2784, retro_pabe_2931, retro_pabe_3330, retro_pabe_3352, retro_pabe_3375, retro_pabe_3788, retro_pabe_385, retro_pabe_420, retro_pabe_566, retro_pabe_77, retro_pabe_827,
Pelodiscus sinensis ENSPSIG00000003295 ortholog_one2one 1 retrogene
retro_psin_60,
Sarcophilus harrisii ENSSHAG00000001357 ortholog_one2many 1 retrogene
retro_shar_799,
Sarcophilus harrisii ENSSHAG00000002052 ortholog_one2many 3 retrogenes
retro_shar_131, retro_shar_324, retro_shar_419,
Tupaia belangeri ENSTBEG00000003574 ortholog_one2one 24 retrogenes
retro_tbel_1109, retro_tbel_1298, retro_tbel_1337, retro_tbel_1532, retro_tbel_1781, retro_tbel_1857, retro_tbel_1941, retro_tbel_213, retro_tbel_2162, retro_tbel_2165, retro_tbel_2372, retro_tbel_2391, retro_tbel_2601, retro_tbel_279, retro_tbel_335, retro_tbel_3606, retro_tbel_3984, retro_tbel_4059, retro_tbel_4398, retro_tbel_657, retro_tbel_74, retro_tbel_901, retro_tbel_974, retro_tbel_983,
Xenopus tropicalis ENSXETG00000021095 ortholog_one2many 1 retrogene
retro_xtro_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_147 67.52 100.00
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2. retro_amel_240 62.61 95.73
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3. retro_amel_368 69.75 100.00
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4. retro_amel_388 72.65 96.58
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5. retro_amel_410 69.23 100.00
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6. retro_amel_477 62.67 61.54
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7. retro_amel_655 56.67 75.21
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8. retro_amel_690 72.97 60.68
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9. retro_amel_739 61.76 58.12
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10. retro_amel_874 83.05 100.00
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11. retro_amel_936 63.87 100.00
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12. retro_amel_949 62.71 100.00
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13. retro_amel_978 69.23 99.15
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14. retro_amel_1151 67.78 76.92
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15. retro_amel_1298 75.64 65.81
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16. retro_amel_1402 87.72 96.58
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17. retro_amel_1595 86.44 100.00
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18. retro_amel_1670 84.75 100.00
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19. retro_amel_1678 77.12 99.15
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20. retro_amel_1755 81.20 100.00
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Download FASTA sequences of all ENSAMEG00000001758 retrocopies