Parental gene:

RPL34, ENSLAFG00000032615

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_14:17126590..17131656(+)


>ENSLAFG00000032615
CTCTTCCGGGGTCGCTGTGTGGAGGCATTCAAAATGGTCCAGCGTCTGACCTACCGTCGTAGGCTGTCCTACAATACAGC
CTCTAACAAAACTAGGCTGTCCCGAACCCCTGGTAATAGAATTGTTTACCTTTATACCAAGAAGGTTGGTAAAGCACCAA
AATCTGCATGTGGCGTGTGCCCCGGCCGACTTAGAGGGGTTCGTGCTGTGAGACCTAAAGTTCTCATGAGGTTGTCCAAA
ACAAAAAAACATGTCAGCAGGGCCTATGGTGGTTCCATGTGTGCTAAGTGTGTCCGTGACAGGATCAAGCGTGCTTTCCT
TATTGAGGAGCAGAAAATCGTTGTCAAAGTATTGAAGGCACAAGCACAGAGTCAAAAAGCT

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001758 ortholog_one2one 20 retrogenes
Bos taurus ENSBTAG00000014226 ortholog_one2one 13 retrogenes
Choloepus hoffmanni ENSCHOG00000009074 ortholog_one2one 10 retrogenes
Callithrix jacchus ENSCJAG00000015993 ortholog_one2many 4 retrogenes
Cavia porcellus ENSCPOG00000000802 ortholog_one2one 6 retrogenes
Dasypus novemcinctus ENSDNOG00000011179 ortholog_one2one 26 retrogenes
Equus caballus ENSECAG00000019719 ortholog_one2many 1 retrogene
Erinaceus europaeus ENSEEUG00000010390 ortholog_one2one 5 retrogenes
Felis catus ENSFCAG00000015502 ortholog_one2one 16 retrogenes
Homo sapiens ENSG00000109475 ortholog_one2one 33 retrogenes
Gorilla gorilla ENSGGOG00000007650 ortholog_one2one 32 retrogenes
Gadus morhua ENSGMOG00000009982 ortholog_one2one 1 retrogene
Macropus eugenii ENSMEUG00000009361 ortholog_one2one 3 retrogenes
Microcebus murinus ENSMICG00000002180 ortholog_one2one 32 retrogenes
Myotis lucifugus ENSMLUG00000000464 ortholog_one2many 4 retrogenes
Macaca mulatta ENSMMUG00000011901 ortholog_one2many 1 retrogene
Monodelphis domestica ENSMODG00000020601 ortholog_one2one 3 retrogenes
Mustela putorius furo ENSMPUG00000008873 ortholog_one2many 17 retrogenes
Mus musculus ENSMUSG00000062006 ortholog_one2many 26 retrogenes
Nomascus leucogenys ENSNLEG00000012934 ortholog_one2many 20 retrogenes
Otolemur garnettii ENSOGAG00000006774 ortholog_one2many 1 retrogene
Ochotona princeps ENSOPRG00000001780 ortholog_one2one 11 retrogenes
Pongo abelii ENSPPYG00000014988 ortholog_one2many 18 retrogenes
Pelodiscus sinensis ENSPSIG00000003295 ortholog_one2one 1 retrogene
Pan troglodytes ENSPTRG00000016353 ortholog_one2one 31 retrogenes
Pteropus vampyrus ENSPVAG00000005914 ortholog_one2one 9 retrogenes
Rattus norvegicus ENSRNOG00000016387 ortholog_one2many 36 retrogenes
Sorex araneus ENSSARG00000000177 ortholog_one2one 8 retrogenes
Sarcophilus harrisii ENSSHAG00000001357 ortholog_one2many 1 retrogene
Sarcophilus harrisii ENSSHAG00000002052 ortholog_one2many 3 retrogenes
Sus scrofa ENSSSCG00000009146 ortholog_one2one 8 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000025964 ortholog_one2one 14 retrogenes
Tupaia belangeri ENSTBEG00000003574 ortholog_one2one 24 retrogenes
Tarsius syrichta ENSTSYG00000001781 ortholog_one2one 34 retrogenes
Tursiops truncatus ENSTTRG00000003443 ortholog_one2one 6 retrogenes
Vicugna pacos ENSVPAG00000005953 ortholog_one2one 9 retrogenes
Xenopus tropicalis ENSXETG00000021095 ortholog_one2many 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_182 75.83 94.49
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2. retro_lafr_298 79.31 91.34
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3. retro_lafr_306 68.55 95.28
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4. retro_lafr_733 70.97 72.44
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5. retro_lafr_1039 68.67 64.57
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6. retro_lafr_1232 67.53 60.63
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Download FASTA sequences of all ENSLAFG00000032615 retrocopies