RetrogeneDB ID: | retro_amel_1755 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194215.1:190377..190728(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSAMEG00000001758 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.2 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLSKT |
MVQ.LTY.RR.S.N.ASNKTRL.RTPGNRI.YLYT.K.GKAPKSA.GV.P..LRGVRAV..KVLMRLSK. | |
Retrocopy | MVQHLTYSRRQSHNIASNKTRLPRTPGNRIIYLYTRKAGKAPKSAYGVYPV*LRGVRAVGAKVLMRLSKM |
Parental | KKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQSQKAK |
.KHVSRAYGG..CAKCV.DRIKRAF.IEEQKI.VKVLKAQAQSQKAK | |
Retrocopy | IKHVSRAYGGFLCAKCVCDRIKRAFSIEEQKIIVKVLKAQAQSQKAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |