RetrogeneDB ID: | retro_amel_936 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192758.1:826785..827134(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL34 | ||
Ensembl ID: | ENSAMEG00000001758 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 63.87 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MVQRLTYRR-RLSYNTASNKTRLSRTPGNRIVYLYTKKVGK-APKSACGVCPGRLRGVRAVRPKVLMRLS |
MVQ.LTY...RLSYNTASNK.RL...PG.RI..L..KK.G....KS.CG...G.L..V.A....VLMRLS | |
Retrocopy | MVQHLTYPV<RLSYNTASNKSRLP*APGIRIISLHDKKSGT<STKSTCGMWSGQLQRVCAMGSRVLMRLS |
Parental | KTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQAQSQKAK |
KTKKHV....G.S..AKCVRDRIK.AFLIEE.KI.VKVLKA.AQ.QKA. | |
Retrocopy | KTKKHVIQPHGASTVAKCVRDRIKNAFLIEEKKIIVKVLKA*AQNQKAR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |