Parental gene:

UQCRH, ENSBTAG00000009603

Aliases:None
Description:Cytochrome b-c1 complex subunit 6, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P00126]
Organism:Cow (Bos taurus)
Coordinates:3:100391832..100401195(-)


>ENSBTAG00000009603
ATGGGGCTAGAGGACGAGCAAAGGATGCTGACCGGATCCGGAGATCCCAAGGAGGAGGAAGAGGAGGAGGAGGAATTAGT
GGATCCCCTAACAACAGTGAGAGAGCAATGCGAGCAGCTGGAGAAATGTGTAAAGGCTCGGGAGCGGCTCGAGCTCTGTG
ATGAGCGTGTATCCTCCAGGTCACAGACAGAGGAGGACTGCACAGAGGAGCTCTTGGATTTCTTGCATGCAAGGGACCAT
TGTGTGGCCCACAAACTGTTTAACAGCTTGAAATAA

Library Parental gene expression (RPM)
SRP017611_brain 52 .71 RPM
SRP017611_kidney 75 .87 RPM
SRP017611_liver 21 .29 RPM
ERP005899_muscle 149 .71 RPM
ERP005899_liver 40 .73 RPM
SRP030211_testis 34 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000021126 ortholog_one2many 5 retrogenes
retro_cjac_1303, retro_cjac_1337, retro_cjac_2726, retro_cjac_3338, retro_cjac_962,
Homo sapiens ENSG00000173660 ortholog_one2one 5 retrogenes
retro_hsap_2085, retro_hsap_2659, retro_hsap_3200, retro_hsap_348, retro_hsap_564,
Gorilla gorilla ENSGGOG00000010631 ortholog_one2many 1 retrogene
retro_ggor_1855,
Macropus eugenii ENSMEUG00000006850 ortholog_one2one 1 retrogene
retro_meug_1932,
Mus musculus ENSMUSG00000063882 ortholog_one2one 4 retrogenes
retro_mmus_1426, retro_mmus_1965, retro_mmus_2126, retro_mmus_894,
Nomascus leucogenys ENSNLEG00000016523 ortholog_one2one 4 retrogenes
retro_nleu_1152, retro_nleu_1529, retro_nleu_2134, retro_nleu_2212,
Oryctolagus cuniculus ENSOCUG00000007600 ortholog_one2one 1 retrogene
retro_ocun_1410,
Otolemur garnettii ENSOGAG00000001134 ortholog_one2one 2 retrogenes
retro_ogar_487, retro_ogar_763,
Ochotona princeps ENSOPRG00000016059 ortholog_one2one 1 retrogene
retro_opri_489,
Pongo abelii ENSPPYG00000025831 ortholog_one2many 4 retrogenes
retro_pabe_2314, retro_pabe_2653, retro_pabe_516, retro_pabe_7,
Pan troglodytes ENSPTRG00000000691 ortholog_one2one 4 retrogenes
retro_ptro_1534, retro_ptro_1792, retro_ptro_2246, retro_ptro_422,
Rattus norvegicus ENSRNOG00000012550 ortholog_one2one 1 retrogene
retro_rnor_1227,
Sorex araneus ENSSARG00000006763 ortholog_one2one 1 retrogene
retro_sara_110,
Tupaia belangeri ENSTBEG00000011608 ortholog_one2one 2 retrogenes
retro_tbel_1692, retro_tbel_2458,
Tarsius syrichta ENSTSYG00000006572 ortholog_one2one 2 retrogenes
retro_tsyr_1821, retro_tsyr_2156,
Tursiops truncatus ENSTTRG00000006326 ortholog_one2many 1 retrogene
retro_ttru_622,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_691 54.29 74.73
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2. retro_btau_732 64.13 100.00
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3. retro_btau_1247 87.91 100.00
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Download FASTA sequences of all ENSBTAG00000009603 retrocopies