Parental gene: | UQCRH, ENSPPYG00000025831 |
| Aliases: | None |
| Description: | ubiquinol-cytochrome c reductase hinge protein [Source:HGNC Symbol;Acc:12590] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:183574425..183587331(-) |
>ENSPPYG00000025831
ATGGGACTGGAGGACGAGCAAAAGATGCTTACCGAATCCGGAGATCCTGAGGAGGAGGAAGAGGAAGAGGAGGAATTAGT
GGATCCCCTAACAACAGTGAGAGAGCAATGCGAGCAGTTGGAGAAATGTGTAAAGGCCCGGGAGCGGCTAGAGCTCTGTG
ATGAGCGTGTATCCTCTCGATCACATACAGAAGAGGATTGCACGGAGGAGCTCTTTGACTTCTTGCATGCAAGGGACCAT
TGTGTGGCCCACAAACTCTTTAACAACTTGAAATAA
ATGGGACTGGAGGACGAGCAAAAGATGCTTACCGAATCCGGAGATCCTGAGGAGGAGGAAGAGGAAGAGGAGGAATTAGT
GGATCCCCTAACAACAGTGAGAGAGCAATGCGAGCAGTTGGAGAAATGTGTAAAGGCCCGGGAGCGGCTAGAGCTCTGTG
ATGAGCGTGTATCCTCTCGATCACATACAGAAGAGGATTGCACGGAGGAGCTCTTTGACTTCTTGCATGCAAGGGACCAT
TGTGTGGCCCACAAACTCTTTAACAACTTGAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 95 .93 RPM |
| SRP007412_cerebellum | 79 .28 RPM |
| SRP007412_heart | 135 .59 RPM |
| SRP007412_kidney | 114 .39 RPM |
| SRP007412_liver | 37 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009603 | ortholog_one2many | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000021126 | ortholog_many2many | 5 retrogenes | |
| Homo sapiens | ENSG00000173660 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010631 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006850 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000063882 | ortholog_one2many | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000016523 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000007600 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001134 | ortholog_one2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000016059 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000691 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000012550 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000006763 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000011608 | ortholog_one2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000006572 | ortholog_one2many | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000006326 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_7 | 85.26 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_516 | 83.52 | 98.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2314 | 70.97 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2653 | 65.45 | 60.44 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000025831 retrocopies