Parental gene:

RAB18, ENSBTAG00000009871

Aliases:None
Description:Ras-related protein Rab-18 [Source:UniProtKB/Swiss-Prot;Acc:Q0IIG8]
Organism:Cow (Bos taurus)
Coordinates:13:37303893..37331999(-)


>ENSBTAG00000009871
ATGGACGAGGACGTGCTGACCACCCTGAAGATCCTCATCATCGGCGAGAGCGGCGTGGGCAAGTCCAGCCTGCTCTTGAG
GTTCACAGATGATACTTTTGATCCAGAACTTGCAGCAACAATAGGTGTTGATTTTAAGGTGAAAACAATTTCAGTGGACG
GAAATAAGGCAAAACTTGCAATATGGGATACTGCTGGTCAAGAAAGATTCAGAACATTAACTCCCAGCTATTATAGAGGT
GCACAGGGTGTTATATTAGTTTATGATGTCACAAGAAGAGACACCTTTGTAAAACTGGATAATTGGTTAAATGAGTTGGA
AACATACTGCACGAGAAATGACATAGTAAACATGCTAGTTGGAAATAAAATTGATAAGGAAAATCGTGAAGTTGATAGAA
ATGAAGGCCTGAAATTTGCACGAAAGCATTCCATGTTATTTATAGAGGCAAGTGCAAAAACCTGTGATGGTGTACAGTGT
GCTTTTGAGGAACTTGTTGAAAAGATCATTCAGACCCCTGGACTGTGGGAAAGTGAGAACCAGAATAAAGGAGTCAAGCT
GACACACAGGGAAGAAGGCCAAGGAGGCGGAGCGTGTGGTGGTTACTGTTCTGTGTTATAA

Library Parental gene expression (RPM)
SRP017611_brain 79 .94 RPM
SRP017611_kidney 69 .05 RPM
SRP017611_liver 55 .27 RPM
ERP005899_muscle 47 .35 RPM
ERP005899_liver 66 .91 RPM
SRP030211_testis 51 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005565 ortholog_one2one 4 retrogenes
retro_chof_2391, retro_chof_256, retro_chof_396, retro_chof_846,
Cavia porcellus ENSCPOG00000002234 ortholog_one2one 2 retrogenes
retro_cpor_633, retro_cpor_652,
Dipodomys ordii ENSDORG00000014338 ortholog_one2one 1 retrogene
retro_dord_419,
Monodelphis domestica ENSMODG00000008253 ortholog_one2many 1 retrogene
retro_mdom_146,
Oryctolagus cuniculus ENSOCUG00000022307 ortholog_one2one 2 retrogenes
retro_ocun_1699, retro_ocun_841,
Otolemur garnettii ENSOGAG00000028015 ortholog_one2one 2 retrogenes
retro_ogar_2587, retro_ogar_2973,
Rattus norvegicus ENSRNOG00000018972 ortholog_one2one 2 retrogenes
retro_rnor_2744, retro_rnor_2962,
Sarcophilus harrisii ENSSHAG00000007613 ortholog_one2one 1 retrogene
retro_shar_281,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1691 97.09 100.00
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Download FASTA sequences of all ENSBTAG00000009871 retrocopies