Parental gene: | Rab18, ENSRNOG00000018972 |
| Aliases: | None |
| Description: | Ras-related protein Rab-18 [Source:UniProtKB/Swiss-Prot;Acc:Q5EB77] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 17:61632852..61664236(+) |
>ENSRNOG00000018972
ATGGACGAGGACGTGCTGACCACTCTGAAGATCCTCATCATTGGCGAGAGTGGGGTGGGCAAGTCCAGCCTGCTCCTGAG
GTTCACAGACGACACCTTTGATCCAGAACTTGCAGCAACAATAGGTGTTGACTTTAAGGTGAAAACGATTTCAGTGGATG
GAAATAAGGCTAAACTTGCAATATGGGATACAGCTGGTCAAGAAAGGTTCAGAACATTAACTCCCAGCTATTATAGAGGT
GCACAGGGAGTTATATTAGTCTATGATGTCACAAGAAGAGACACCTTTGTTAAACTGGATAATTGGTTAAATGAATTGGA
AACATACTGTACAAGAAATGACATAGTAAACATGCTAGTTGGAAATAAAATTGATAAGGAAAACCGTGAAGTCGATAGAA
ATGAAGGCTTGAAATTTGCACGCAAGCATTCTATGTTGTTCATAGAGGCAAGTGCAAAAACCTGTGATGGTGTTCAGTGT
GCCTTTGAGGAGCTGGTTGAAAAGATCATCCAGACACCTGGACTGTGGGAAAGTGAGAACCAGAACAAAGGAGTCAAGCT
GTCCCCCAGGGAGGAGAGCCACGGGGGAGGAGCCTGTGGCGGTTACTGTTCTGTGCTATAA
ATGGACGAGGACGTGCTGACCACTCTGAAGATCCTCATCATTGGCGAGAGTGGGGTGGGCAAGTCCAGCCTGCTCCTGAG
GTTCACAGACGACACCTTTGATCCAGAACTTGCAGCAACAATAGGTGTTGACTTTAAGGTGAAAACGATTTCAGTGGATG
GAAATAAGGCTAAACTTGCAATATGGGATACAGCTGGTCAAGAAAGGTTCAGAACATTAACTCCCAGCTATTATAGAGGT
GCACAGGGAGTTATATTAGTCTATGATGTCACAAGAAGAGACACCTTTGTTAAACTGGATAATTGGTTAAATGAATTGGA
AACATACTGTACAAGAAATGACATAGTAAACATGCTAGTTGGAAATAAAATTGATAAGGAAAACCGTGAAGTCGATAGAA
ATGAAGGCTTGAAATTTGCACGCAAGCATTCTATGTTGTTCATAGAGGCAAGTGCAAAAACCTGTGATGGTGTTCAGTGT
GCCTTTGAGGAGCTGGTTGAAAAGATCATCCAGACACCTGGACTGTGGGAAAGTGAGAACCAGAACAAAGGAGTCAAGCT
GTCCCCCAGGGAGGAGAGCCACGGGGGAGGAGCCTGTGGCGGTTACTGTTCTGTGCTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 27 .03 RPM |
| SRP017611_kidney | 36 .22 RPM |
| SRP017611_brain | 43 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009871 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005565 | ortholog_one2one | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000002234 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000014338 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008253 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000022307 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000028015 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000007613 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2744 | 95.67 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2962 | 60.66 | 58.25 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000018972 retrocopies