Parental gene: | RAB18, ENSOCUG00000022307 |
| Aliases: | None |
| Description: | RAB18, member RAS oncogene family [Source:HGNC Symbol;Acc:14244] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 16:6635368..6677959(+) |
>ENSOCUG00000022307
ATGGACGAGGACGTGCTGACCACCCTGAAGATCCTCATCATCGGCGAGAGCGGAGTCGGCAAGTCCAGCCTGCTGTTGAG
GTTCACAGATGATACTTTTGATCCAGAGCTCGCAGCAACTATAGGTGTCGACTTTAAGGTGAAAACAATTTCAGTGGATG
GAAATAAGGCTAAACTTGCAATATGGGATACTGCTGGTCAAGAGAGGTTTAGAACTCTAACTCCAAGTTATTACAGAGGT
GCACAGGGTGTTATTTTAGTTTATGATGTCACGAGAAGGGACACCTTTGTTAAACTGGATAATTGGTTAAATGAATTGGA
AACATACTGTACGAGAAATGACATAGTAAACATGCTAGTTGGAAATAAAATTGATAAGGAAAATCGTGAAGTCGACAGAA
ATGAAGGCCTGAAGTTTGCACGGAAGCATTCCATGTTATTTATAGAGGCAAGTGCAAAAACGTGTGATGGTGTCCAGTGT
GCCTTTGAGGAGCTTGTCGAAAAGATCATTCAGACACCCGGACTGTGGGAGAGCGAGACCCAGAACAAAGGAGTGAAACT
GTCGCACAGGGAAGAAGGCCACGGGGCAGGCGCCTGCAGTGGTTACTGCTCTGTGCTGTGA
ATGGACGAGGACGTGCTGACCACCCTGAAGATCCTCATCATCGGCGAGAGCGGAGTCGGCAAGTCCAGCCTGCTGTTGAG
GTTCACAGATGATACTTTTGATCCAGAGCTCGCAGCAACTATAGGTGTCGACTTTAAGGTGAAAACAATTTCAGTGGATG
GAAATAAGGCTAAACTTGCAATATGGGATACTGCTGGTCAAGAGAGGTTTAGAACTCTAACTCCAAGTTATTACAGAGGT
GCACAGGGTGTTATTTTAGTTTATGATGTCACGAGAAGGGACACCTTTGTTAAACTGGATAATTGGTTAAATGAATTGGA
AACATACTGTACGAGAAATGACATAGTAAACATGCTAGTTGGAAATAAAATTGATAAGGAAAATCGTGAAGTCGACAGAA
ATGAAGGCCTGAAGTTTGCACGGAAGCATTCCATGTTATTTATAGAGGCAAGTGCAAAAACGTGTGATGGTGTCCAGTGT
GCCTTTGAGGAGCTTGTCGAAAAGATCATTCAGACACCCGGACTGTGGGAGAGCGAGACCCAGAACAAAGGAGTGAAACT
GTCGCACAGGGAAGAAGGCCACGGGGCAGGCGCCTGCAGTGGTTACTGCTCTGTGCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 16 .19 RPM |
| SRP017611_kidney | 31 .62 RPM |
| SRP017611_brain | 31 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009871 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005565 | ortholog_one2one | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000002234 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000014338 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008253 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000028015 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018972 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000007613 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_841 | 63.19 | 77.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1699 | 98.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000022307 retrocopies