Parental gene: | RAB18, ENSCHOG00000005565 |
| Aliases: | None |
| Description: | RAB18, member RAS oncogene family [Source:HGNC Symbol;Acc:14244] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_1181:2898..18952(+) |
>ENSCHOG00000005565
GGGACGTCTTTGAAAATAAAGCGAAATTGCCACTTCTGCCACATTGTGAGTCTTTTATGTCTGACTCTTTGGGGGAAAAT
AATATTGACAGTTGAGTGGAGGATAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGTGTTGACTTTAAGGTGAAAACAATTTCAGTGGATGGAAATAAGGCTAAACTTGCAATATGGTTGCATCAGTGGACA
GCAATCTTTATGTTAAAGGGCCAGATAGTAAATAGACCAAGTCTAAAGTGGACCATCTGGAAATACGATACTGCTGGTCA
AGAGCGGTTCAGAACATTAACTCCCAGCTATTATAGAGGTGCACAAGGTGTTATATTAGTTTATGATGTCACAAGAAGGG
ACACCTTTCTTAAACTCGATAATTGGTTAAATGAATTGGAAACATACTGCACAAGAAATGACATAGTAAACATGCTAGTT
GGAAATAAAATTGATAAGGAAAATCGCGAAGTTGATAGAAACGAAGGACTGAAATTTGCACGAAAGCATTCCATGTTATT
CATAGAGGCAAGTGCAAAAACCTGTGATGGTGTCCAGTGTGCCTTTGAGGAACTTGTTGAAAAGATCATTCAGACCCCTG
GACTTTGGGAAAGTGAGAACCAGAATAAAGGAGTAAAACTGTCACACAGGGAAGAACGCCAAGGAGGCGCCTGTGGTGGC
TATTGTTCTGTGTTATAA
GGGACGTCTTTGAAAATAAAGCGAAATTGCCACTTCTGCCACATTGTGAGTCTTTTATGTCTGACTCTTTGGGGGAAAAT
AATATTGACAGTTGAGTGGAGGATAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGTGTTGACTTTAAGGTGAAAACAATTTCAGTGGATGGAAATAAGGCTAAACTTGCAATATGGTTGCATCAGTGGACA
GCAATCTTTATGTTAAAGGGCCAGATAGTAAATAGACCAAGTCTAAAGTGGACCATCTGGAAATACGATACTGCTGGTCA
AGAGCGGTTCAGAACATTAACTCCCAGCTATTATAGAGGTGCACAAGGTGTTATATTAGTTTATGATGTCACAAGAAGGG
ACACCTTTCTTAAACTCGATAATTGGTTAAATGAATTGGAAACATACTGCACAAGAAATGACATAGTAAACATGCTAGTT
GGAAATAAAATTGATAAGGAAAATCGCGAAGTTGATAGAAACGAAGGACTGAAATTTGCACGAAAGCATTCCATGTTATT
CATAGAGGCAAGTGCAAAAACCTGTGATGGTGTCCAGTGTGCCTTTGAGGAACTTGTTGAAAAGATCATTCAGACCCCTG
GACTTTGGGAAAGTGAGAACCAGAATAAAGGAGTAAAACTGTCACACAGGGAAGAACGCCAAGGAGGCGCCTGTGGTGGC
TATTGTTCTGTGTTATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009871 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000002234 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000014338 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008253 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000022307 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000028015 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018972 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000007613 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_256 | 73.76 | 57.55 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_396 | 68.53 | 57.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_846 | 74.68 | 61.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_2391 | 88.41 | 66.53 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000005565 retrocopies