Parental gene: | RPS24, ENSBTAG00000013264 |
| Aliases: | None |
| Description: | 40S ribosomal protein S24 [Source:UniProtKB/Swiss-Prot;Acc:Q56JU9] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 28:33926496..33931777(+) |
>ENSBTAG00000013264
ATGAACGACACAGTAACTATCCGGACTAGGAAGTTCATGACCAACCGACTGCTTCAGCGGAAACAAATGGTCATCGATGT
TCTTCACCCTGGAAAGGCAACAGTACCTAAAACAGAAATTCGGGAAAAACTGGCCAAAATGTACAAGACCACACCAGATG
TCATCTTTGTATTTGGGTTCAGAACGCATTTTGGTGGTGGCAAGACAACTGGCTTTGGCATGATTTACGATTCCTTGGAT
TACGCGAAGAAGAATGAGCCCAAACACAGGCTTGCGAGACATGGCCTATATGAGAAGAAAAAGACCTCACGAAAACAGCG
GAAGGAACGCAAGAACAGAATGAAGAAAGTCAGGGGGACTGCAAAGGCCAACGTTGGTGCTGGCAAAAAGTGA
ATGAACGACACAGTAACTATCCGGACTAGGAAGTTCATGACCAACCGACTGCTTCAGCGGAAACAAATGGTCATCGATGT
TCTTCACCCTGGAAAGGCAACAGTACCTAAAACAGAAATTCGGGAAAAACTGGCCAAAATGTACAAGACCACACCAGATG
TCATCTTTGTATTTGGGTTCAGAACGCATTTTGGTGGTGGCAAGACAACTGGCTTTGGCATGATTTACGATTCCTTGGAT
TACGCGAAGAAGAATGAGCCCAAACACAGGCTTGCGAGACATGGCCTATATGAGAAGAAAAAGACCTCACGAAAACAGCG
GAAGGAACGCAAGAACAGAATGAAGAAAGTCAGGGGGACTGCAAAGGCCAACGTTGGTGCTGGCAAAAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 187 .15 RPM |
| SRP017611_kidney | 336 .31 RPM |
| SRP017611_liver | 240 .49 RPM |
| ERP005899_muscle | 1212 .35 RPM |
| ERP005899_liver | 437 .33 RPM |
| SRP030211_testis | 173 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Felis catus | ENSFCAG00000000849 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000138326 | ortholog_one2one | 3 retrogenes | |
| Gadus morhua | ENSGMOG00000012595 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000027878 | possible_ortholog | 10 retrogenes | |
| Myotis lucifugus | ENSMLUG00000024102 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000003778 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012472 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011005 | possible_ortholog | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000002666 | ortholog_one2one | 10 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000013000 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_285 | 93.75 | 98.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_467 | 73.39 | 94.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_btau_577 | 70.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_btau_586 | 67.67 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_btau_788 | 57.89 | 86.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_btau_980 | 96.12 | 99.23 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_btau_1137 | 62.41 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_btau_1311 | 88.55 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_btau_1562 | 79.69 | 98.46 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000013264 retrocopies