Parental gene: | RPS24, ENSPTRG00000002666 |
| Aliases: | None |
| Description: | ribosomal protein S24 [Source:HGNC Symbol;Acc:10411] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 10:76653176..76657383(+) |
>ENSPTRG00000002666
ATGAACGACACTGTAACTATCCGCACTAGAAAGTTCATGACCAACCGACTCCTTCAGAGGAAACAAATGGTCATTGATGT
CCTTCACCCCGGGAAGGCAACAGTGCCTAAGACAGAAATTCGGGAAAAACTAGCCAAAATGTACAAGACCACACCGGATG
TCATCTTTGTATTTGGATTCAGAACTCATTTTGGTGGTGGCAAGACAACTGGCTTTGGCATGATTTATGATTCCCTGGAT
TATGCAAAGAAAAATGAACCCAAACATAGACTTGCAAGACATGGCCTGTATGAGAAGAAAAAGACCTCAAGAAAGCAACG
AAAGGAACGCAAGAACAGAATGAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTGCTGGCAAAAAGCAGAAATGA
ATGAACGACACTGTAACTATCCGCACTAGAAAGTTCATGACCAACCGACTCCTTCAGAGGAAACAAATGGTCATTGATGT
CCTTCACCCCGGGAAGGCAACAGTGCCTAAGACAGAAATTCGGGAAAAACTAGCCAAAATGTACAAGACCACACCGGATG
TCATCTTTGTATTTGGATTCAGAACTCATTTTGGTGGTGGCAAGACAACTGGCTTTGGCATGATTTATGATTCCCTGGAT
TATGCAAAGAAAAATGAACCCAAACATAGACTTGCAAGACATGGCCTGTATGAGAAGAAAAAGACCTCAAGAAAGCAACG
AAAGGAACGCAAGAACAGAATGAAGAAAGTCAGGGGGACTGCAAAGGCCAATGTTGGTGCTGGCAAAAAGCAGAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 165 .41 RPM |
| SRP007412_cerebellum | 121 .81 RPM |
| SRP007412_heart | 107 .14 RPM |
| SRP007412_kidney | 169 .33 RPM |
| SRP007412_liver | 135 .09 RPM |
| SRP007412_testis | 76 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013264 | ortholog_one2one | 9 retrogenes | |
| Felis catus | ENSFCAG00000000849 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000138326 | ortholog_one2one | 3 retrogenes | |
| Gadus morhua | ENSGMOG00000012595 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000027878 | possible_ortholog | 10 retrogenes | |
| Myotis lucifugus | ENSMLUG00000024102 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000003778 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012472 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011005 | possible_ortholog | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000013000 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_362 | 75.20 | 93.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_393 | 75.56 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_478 | 84.44 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_983 | 87.88 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_1023 | 80.45 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_1114 | 78.63 | 98.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ptro_1257 | 80.77 | 97.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ptro_1555 | 80.00 | 96.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ptro_1885 | 89.55 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_ptro_2376 | 55.56 | 99.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000002666 retrocopies