Parental gene:

RPS24, ENSSTOG00000013000

Aliases:None
Description:ribosomal protein S24 [Source:HGNC Symbol;Acc:10411]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393331.1:1551183..1566665(-)


>ENSSTOG00000013000
AATGACACAGTAACTATCCGGACCAGGAAGTTCATGACCAACCGACTGCTTCAGCGGAAACAAATGGTCATTGATGTTCT
TCACCCTGGGAAAGCAACAGTACCTAAGACAGAAATTCGAGAAAAATTAGCCAAAATGTACAAGACCACACCAGATGTCA
TCTTTGTGTTTGGATTCAGAACCCATTTTGGAGGTGGCAAGACAACTGGCTTTGGCATGATTTATGATTCCTTGGATTAT
GCGAAGAAAAATGAACCCAAACATAGACTGGCAAGACATGGCCTGTATGAAAAGAAGAAGACCTCAAGAAAACAGCGAAA
GGAACGCAAGAACAGAATGAAGAAAGTCAGGGGGACTGCGAAGGCCAATGTTGGTGCTGGCAAAAAGATGAGGGAATTGG
GGTTTGGAGTTGCAAGCAGGGGGGAAATT

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013264 ortholog_one2one 9 retrogenes
retro_btau_1137, retro_btau_1311, retro_btau_1562, retro_btau_285, retro_btau_467, retro_btau_577, retro_btau_586, retro_btau_788, retro_btau_980,
Dipodomys ordii ENSDORG00000000189 possible_ortholog 4 retrogenes
retro_dord_248, retro_dord_498, retro_dord_717, retro_dord_766,
Felis catus ENSFCAG00000000849 possible_ortholog 3 retrogenes
retro_fcat_19, retro_fcat_772, retro_fcat_85,
Homo sapiens ENSG00000138326 ortholog_one2one 3 retrogenes
retro_hsap_1511, retro_hsap_526, retro_hsap_658,
Gadus morhua ENSGMOG00000012595 ortholog_many2many 1 retrogene
retro_gmor_15,
Loxodonta africana ENSLAFG00000027878 possible_ortholog 10 retrogenes
retro_lafr_1017, retro_lafr_190, retro_lafr_303, retro_lafr_340, retro_lafr_439, retro_lafr_558, retro_lafr_596, retro_lafr_669, retro_lafr_854, retro_lafr_995,
Myotis lucifugus ENSMLUG00000024102 ortholog_one2many 1 retrogene
retro_mluc_260,
Mustela putorius furo ENSMPUG00000003778 possible_ortholog 1 retrogene
retro_mputfur_10,
Mus musculus ENSMUSG00000025290 possible_ortholog 13 retrogenes
retro_mmus_1101, retro_mmus_1462, retro_mmus_1589, retro_mmus_1592, retro_mmus_1599, retro_mmus_2134, retro_mmus_2332, retro_mmus_2497, retro_mmus_2984, retro_mmus_3162, retro_mmus_321, retro_mmus_3233, retro_mmus_602,
Oryctolagus cuniculus ENSOCUG00000012472 ortholog_one2one 1 retrogene
retro_ocun_16,
Otolemur garnettii ENSOGAG00000011005 possible_ortholog 3 retrogenes
retro_ogar_1000, retro_ogar_2, retro_ogar_2130,
Pan troglodytes ENSPTRG00000002666 ortholog_one2one 10 retrogenes
retro_ptro_1023, retro_ptro_1114, retro_ptro_1257, retro_ptro_1555, retro_ptro_1885, retro_ptro_2376, retro_ptro_362, retro_ptro_393, retro_ptro_478, retro_ptro_983,
Tarsius syrichta ENSTSYG00000006715 possible_ortholog 1 retrogene
retro_tsyr_1919,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_167 95.45 92.31
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2. retro_itri_376 77.60 85.31
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3. retro_itri_528 62.50 64.34
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4. retro_itri_728 79.85 92.31
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Download FASTA sequences of all ENSSTOG00000013000 retrocopies