Parental gene:

ENSCAFG00000013007

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:32:21249739..21261145(-)


>ENSCAFG00000013007
CTTTTTTCCCCATTTCAGGTTATCAAGTGTAAGGCTGCAGTTGCCTGGGAGGCAGGAAAGCCTCTCTCTATAGAAGAGGT
AGAGGTGGCACCCCCAAAGGCTCATGAAGTTCGAATTAAGATTATTGCCACTGCAGTTTGCCACACCGATGCCTACACCC
TGAGTGGGGCTGATCCTGAAGGAAGTTTTCCAGTGATCCTGGGACATGAAGGTGCTGGAATTGTGGAAAGTGTTGGCGAA
GGAGTTACTAAGCTGAAAGCAGGTGACACTGTCATCCCACTTTACATCCCACAGTGTGGAGAATGCAAATTTTGTCTAAA
TCCTAAAACAAACCTTTGCCAGAAGATAAGAGTTACACAGGGGAAAGGATTAATGCCAGATGGTACTAGCAGATTTACTT
GCAAAGGAAAGACAATTTTACATTATATGGGAACCAGCACATTTTCTGAATATACAGTTGTGGCTGATATCTCTGTTGCT
AAAATTGATCCTTTAGCACCTTTGGATAAAGTCTGCCTTCTCGGTTGTGGCATTTCAACTGGTTATGGTGCTGCTCTGAA
CACTGCCAAGGTGGAGCCTGGCTCTACTTGTGCCGTCTTTGGCCTAGGAGGAGTTGGATTGGCGACTATCATGGGCTGTA
AAGTGGCTGGTGCATCCCGGATCATTGGTGTGGACATCAATAAAGATAAATTCTCAAGGGCCAAGGAGTTTGGAGCCTCT
GAATGTATTAACCCCCAGGACTTTAGTAAACCCATCCAGGAAGTGCTCATTGAAATGACTGACGGGGGAGTGGACTATTC
CTTTGAGTGTATTGGTAACGTGAAAGTCATGAGAGCTGCGCTAGAGGCCTGCCACAAAGGCTGGGGTGTCAGTGTCATAG
TTGGAGTAGCTGCTTCAGGTGAAGAAATCGCCACTCGTCCATTTCAGCTGGTAACAGGGCGCGTATGGAAAGGCACTGCC
TTTGGAGGATGGAAGAGTGTGGAAAGTGTCCCAAAGTTGGTGTCTGAATATATGTCCAGAAAGATAAAAGTTGATGAATT
TGTGACTCACAGTCTGTCTTTTGACCAAATTAATGAAGCCTTTGACCTGTTGCATGCAGGAAAGAGCATTCGGACTGTTG
TAAAGCTTTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 21 .71 RPM
SRP017611_brain 10 .80 RPM
SRP017611_kidney 52 .63 RPM
SRP017611_liver 17 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007198 ortholog_one2many 2 retrogenes
retro_cjac_1029, retro_cjac_2933,
Homo sapiens ENSG00000197894 ortholog_one2many 3 retrogenes
retro_hsap_175, retro_hsap_330, retro_hsap_3607,
Gorilla gorilla ENSGGOG00000028244 ortholog_many2many 2 retrogenes
retro_ggor_2434, retro_ggor_354,
Myotis lucifugus ENSMLUG00000002722 ortholog_one2many 1 retrogene
retro_mluc_1702,
Macaca mulatta ENSMMUG00000003552 ortholog_many2many 1 retrogene
retro_mmul_299,
Mustela putorius furo ENSMPUG00000009642 ortholog_one2many 1 retrogene
retro_mputfur_1625,
Nomascus leucogenys ENSNLEG00000013946 ortholog_one2many 3 retrogenes
retro_nleu_1772, retro_nleu_2636, retro_nleu_983,
Pongo abelii ENSPPYG00000014946 ortholog_many2many 3 retrogenes
retro_pabe_176, retro_pabe_359, retro_pabe_453,
Pan troglodytes ENSPTRG00000016303 ortholog_one2many 3 retrogenes
retro_ptro_166, retro_ptro_2438, retro_ptro_266,
Sus scrofa ENSSSCG00000009185 ortholog_one2many 1 retrogene
retro_sscr_659,
Xenopus tropicalis ENSXETG00000009304 ortholog_one2many 1 retrogene
retro_xtro_57,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_14 100.00 98.67
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Download FASTA sequences of all ENSCAFG00000013007 retrocopies