Parental gene:

ADH5, ENSPPYG00000014946

Aliases:None
Description:alcohol dehydrogenase 5 (class III), chi polypeptide [Source:HGNC Symbol;Acc:253]
Organism:Orangutan (Pongo abelii)
Coordinates:4:103343983..103362154(-)


>ENSPPYG00000014946
ATGGCGAACCAGGTTATCAAGTGCAAGGCTGCAGTTGCTTGGGAGGCTGGAAAGCCACTCTCCATAGAGGAGATAGAGGT
GGCACCCCCAAAGGCTCATGAAGTTCGAATCAAGATCATTGCCACTGCGGTTTGCCACACCGATGCCTATACCCTGAGCG
GAGCTGATCCTGAGGGTTGTTTTCCAGTGATCTTGGGACATGAAGGTGCTGGAATTGTGGAAAGTGTTGGTGAGGGAGTT
ACTAAGCTGAAGGCGGGTGACACTGTCATCCCACTTTACATCCCACAGTGTGGAGAATGCAAATTTTGTCTAAATCCTAA
AACTAACCTTTGCCAGAAGATAAGAGTCACTCAAGGGAAAGGATTAATGCCAGATGGTACCAGCAGATTTACTTGCAAAG
GAAAGACAGTTTTGCATTACATGGGAACCAGCACATTTTCTGAATACACAGTTGTGGCTGATATCTCTGTTGCTAAAATA
GATCCTTTAGCACCTTTGGATAAAGTCTGCCTTCTAGGTTGTGGCATTTCAACTGGTTATGGGGCTGCTGTGAACACTGC
CAAGGTGGAGCCTGGCTCTGTTTGTGCCGTCTTTGGTCTGGGAGGAGTTGGATTGGCAGTTATCATGGGCTGTAAAGTGG
CTGGTGCATCCCGGATCATTGGTGTGGACATCAATAAAGATAAATTTGCAAGGGCCAAAGAGTTTGGAGCCACTGAATGT
ATTAACCCTCAGGATTTTAGTAAACCCATCCAGGAAATGCTCATTGAGATGACTGATGGAGGAGTGGACTATTCCTTTGA
ATGTATTGGTAATGTGAAGGTCATGAGAGCAGCACTTGAGGCATGTCACAAGGGCTGGGGCGTCAGCGTGGTGGTTGGAG
TAGCTGCTTCAGGTGAAGAAATTGCCACTCGTCCATTCCAGCTGGTAACAGGTCGCACATGGAAAGGCACTGCCTTTGGA
GGATGGAAGAGTGTAGAAAGTGTCCCAAAGTTGGTGTCTGAATATATGTCCAAAAAGATAAAAGTTGATGAATTTGTGAC
TCACAATCTGTCTTTTGATGAAATCAACAAAGCCTTTGAACTGATGCATTCTGGAAAGAGCATTCGAACTGTTGTAAAGA
TTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 53 .41 RPM
SRP007412_cerebellum 47 .91 RPM
SRP007412_heart 86 .94 RPM
SRP007412_kidney 192 .42 RPM
SRP007412_liver 157 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013007 ortholog_many2many 1 retrogene
retro_cfam_14,
Callithrix jacchus ENSCJAG00000007198 ortholog_one2many 2 retrogenes
retro_cjac_1029, retro_cjac_2933,
Homo sapiens ENSG00000197894 ortholog_one2one 3 retrogenes
retro_hsap_175, retro_hsap_330, retro_hsap_3607,
Gorilla gorilla ENSGGOG00000028244 ortholog_one2one 2 retrogenes
retro_ggor_2434, retro_ggor_354,
Myotis lucifugus ENSMLUG00000002722 ortholog_one2many 1 retrogene
retro_mluc_1702,
Macaca mulatta ENSMMUG00000003552 ortholog_many2many 1 retrogene
retro_mmul_299,
Mustela putorius furo ENSMPUG00000009642 ortholog_one2many 1 retrogene
retro_mputfur_1625,
Nomascus leucogenys ENSNLEG00000013946 ortholog_one2one 3 retrogenes
retro_nleu_1772, retro_nleu_2636, retro_nleu_983,
Pan troglodytes ENSPTRG00000016303 ortholog_one2one 3 retrogenes
retro_ptro_166, retro_ptro_2438, retro_ptro_266,
Sus scrofa ENSSSCG00000009185 ortholog_one2many 1 retrogene
retro_sscr_659,
Xenopus tropicalis ENSXETG00000009304 ortholog_one2many 1 retrogene
retro_xtro_57,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_176 92.41 98.40
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2. retro_pabe_359 89.10 100.00
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3. retro_pabe_453 86.74 100.00
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Download FASTA sequences of all ENSPPYG00000014946 retrocopies