Parental gene: | ADH5, ENSPPYG00000014946 |
| Aliases: | None |
| Description: | alcohol dehydrogenase 5 (class III), chi polypeptide [Source:HGNC Symbol;Acc:253] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 4:103343983..103362154(-) |
>ENSPPYG00000014946
ATGGCGAACCAGGTTATCAAGTGCAAGGCTGCAGTTGCTTGGGAGGCTGGAAAGCCACTCTCCATAGAGGAGATAGAGGT
GGCACCCCCAAAGGCTCATGAAGTTCGAATCAAGATCATTGCCACTGCGGTTTGCCACACCGATGCCTATACCCTGAGCG
GAGCTGATCCTGAGGGTTGTTTTCCAGTGATCTTGGGACATGAAGGTGCTGGAATTGTGGAAAGTGTTGGTGAGGGAGTT
ACTAAGCTGAAGGCGGGTGACACTGTCATCCCACTTTACATCCCACAGTGTGGAGAATGCAAATTTTGTCTAAATCCTAA
AACTAACCTTTGCCAGAAGATAAGAGTCACTCAAGGGAAAGGATTAATGCCAGATGGTACCAGCAGATTTACTTGCAAAG
GAAAGACAGTTTTGCATTACATGGGAACCAGCACATTTTCTGAATACACAGTTGTGGCTGATATCTCTGTTGCTAAAATA
GATCCTTTAGCACCTTTGGATAAAGTCTGCCTTCTAGGTTGTGGCATTTCAACTGGTTATGGGGCTGCTGTGAACACTGC
CAAGGTGGAGCCTGGCTCTGTTTGTGCCGTCTTTGGTCTGGGAGGAGTTGGATTGGCAGTTATCATGGGCTGTAAAGTGG
CTGGTGCATCCCGGATCATTGGTGTGGACATCAATAAAGATAAATTTGCAAGGGCCAAAGAGTTTGGAGCCACTGAATGT
ATTAACCCTCAGGATTTTAGTAAACCCATCCAGGAAATGCTCATTGAGATGACTGATGGAGGAGTGGACTATTCCTTTGA
ATGTATTGGTAATGTGAAGGTCATGAGAGCAGCACTTGAGGCATGTCACAAGGGCTGGGGCGTCAGCGTGGTGGTTGGAG
TAGCTGCTTCAGGTGAAGAAATTGCCACTCGTCCATTCCAGCTGGTAACAGGTCGCACATGGAAAGGCACTGCCTTTGGA
GGATGGAAGAGTGTAGAAAGTGTCCCAAAGTTGGTGTCTGAATATATGTCCAAAAAGATAAAAGTTGATGAATTTGTGAC
TCACAATCTGTCTTTTGATGAAATCAACAAAGCCTTTGAACTGATGCATTCTGGAAAGAGCATTCGAACTGTTGTAAAGA
TTTAA
ATGGCGAACCAGGTTATCAAGTGCAAGGCTGCAGTTGCTTGGGAGGCTGGAAAGCCACTCTCCATAGAGGAGATAGAGGT
GGCACCCCCAAAGGCTCATGAAGTTCGAATCAAGATCATTGCCACTGCGGTTTGCCACACCGATGCCTATACCCTGAGCG
GAGCTGATCCTGAGGGTTGTTTTCCAGTGATCTTGGGACATGAAGGTGCTGGAATTGTGGAAAGTGTTGGTGAGGGAGTT
ACTAAGCTGAAGGCGGGTGACACTGTCATCCCACTTTACATCCCACAGTGTGGAGAATGCAAATTTTGTCTAAATCCTAA
AACTAACCTTTGCCAGAAGATAAGAGTCACTCAAGGGAAAGGATTAATGCCAGATGGTACCAGCAGATTTACTTGCAAAG
GAAAGACAGTTTTGCATTACATGGGAACCAGCACATTTTCTGAATACACAGTTGTGGCTGATATCTCTGTTGCTAAAATA
GATCCTTTAGCACCTTTGGATAAAGTCTGCCTTCTAGGTTGTGGCATTTCAACTGGTTATGGGGCTGCTGTGAACACTGC
CAAGGTGGAGCCTGGCTCTGTTTGTGCCGTCTTTGGTCTGGGAGGAGTTGGATTGGCAGTTATCATGGGCTGTAAAGTGG
CTGGTGCATCCCGGATCATTGGTGTGGACATCAATAAAGATAAATTTGCAAGGGCCAAAGAGTTTGGAGCCACTGAATGT
ATTAACCCTCAGGATTTTAGTAAACCCATCCAGGAAATGCTCATTGAGATGACTGATGGAGGAGTGGACTATTCCTTTGA
ATGTATTGGTAATGTGAAGGTCATGAGAGCAGCACTTGAGGCATGTCACAAGGGCTGGGGCGTCAGCGTGGTGGTTGGAG
TAGCTGCTTCAGGTGAAGAAATTGCCACTCGTCCATTCCAGCTGGTAACAGGTCGCACATGGAAAGGCACTGCCTTTGGA
GGATGGAAGAGTGTAGAAAGTGTCCCAAAGTTGGTGTCTGAATATATGTCCAAAAAGATAAAAGTTGATGAATTTGTGAC
TCACAATCTGTCTTTTGATGAAATCAACAAAGCCTTTGAACTGATGCATTCTGGAAAGAGCATTCGAACTGTTGTAAAGA
TTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 53 .41 RPM |
| SRP007412_cerebellum | 47 .91 RPM |
| SRP007412_heart | 86 .94 RPM |
| SRP007412_kidney | 192 .42 RPM |
| SRP007412_liver | 157 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000013007 | ortholog_many2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000007198 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000197894 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028244 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000002722 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003552 | ortholog_many2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000009642 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013946 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000016303 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000009185 | ortholog_one2many | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000009304 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_176 | 92.41 | 98.40 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_359 | 89.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_453 | 86.74 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000014946 retrocopies