Parental gene:

ADH5, ENSSSCG00000009185

Aliases:None
Description:alcohol dehydrogenase 5 (class III), chi polypeptide [Source:HGNC Symbol;Acc:253]
Organism:Pig (Sus scrofa)
Coordinates:8:130451259..130466903(+)


>ENSSSCG00000009185
ATGGCGAACCAGGTCATCAAGTGCAAGGCTGCGGTTGCCTGGGAGGCTGGAAAGCCTCTCTCCATAGAGGAGATAGAGGT
GGCACCCCCAAAGGCTCATGAAGTTCGAATTAAGATTATTGCCACTGCAGTTTGCCACACTGATGCCTATACCCTGAGTG
GGGCTGATCCTGAAGGGAGTTTTCCAGTGATCCTGGGACACGAAGGTGCTGGAATTGTGGAAAGTGTTGGTGAAGGAGTT
ACTAAGCTTAAGGCAGGTGATACTGTCATCCCACTTTACATCCCACAGTGTGGAGAATGCAAATTTTGTCTAAATCCTAA
AACAAACCTTTGCCAGAAAATAAGAGTCACTCAAGGGAAAGGCTTAATGCCAGATGGCACTAGCAGATTTACTTGTAAAG
GAAAGACAATTTTACATTACATGGGAACCAGTACCTTTTCTGAATACACAGTTGTGGCTGACATCTCTGTTGCTAAAATT
GATCCTTTGGCCCCTTTGGATAAAGTCTGCCTTCTGGGTTGTGGCGTTTCAACTGGTTATGGTGCGGCTGTGAACACTGC
CAAGGTGGAGCCTGGCTCTACTTGTGCTGTCTTTGGCCTGGGAGGAGTTGGATTGGCAGTTATCATGGGCTGTAAGGTGG
CTGGTGCATCCCGGATCATTGGTGTGGACATCAATAAAGATAAATTCGCAAGGGCCAAGGAGTTTGGAGCTTCTGAATGT
ATTAACCCCCAGGATTTCAGTAAACCTATCCAGGAAGTGCTCATTGAGATGACTGATGGGGGAGTGGACTATTCCTTTGA
GTGTATTGGTAACGTGAAAGTCATGAGAGCAGCGCTGGAGGCCTGCCACAAAGGCTGGGGTGTCAGCGTGGTGGTTGGAG
TAGCTGCTTCGGGCGAAGAAATCGCCACTCGTCCATTCCAGCTGGTCACAGGCCGCACATGGAAAGGCACTGCGTTTGGA
GGATGGAAGAGTGTAGAAAGCATCCCAAAGTTGGTGTCAGAATACATGTCCAAAAAAATAAAGGTTGATGAATTTGTGAC
TCACAATCTGCCTTTTGACCAAATAAACGAAGCCTTTGAACTGATGCATGCAGGGAAAAGCATCCGAACAGTCATAAAGC
TTTAA

Library Parental gene expression (RPM)
SRP014902_placenta 30 .26 RPM
SRP014902_testis 98 .87 RPM
SRP018856_adipose 127 .16 RPM
SRP018288_kidney 263 .60 RPM
SRP018288_lung 34 .32 RPM
SRP018288_liver 157 .83 RPM
SRP018288_heart 53 .17 RPM
SRP035408_liver 204 .87 RPM
SRP035408_brain 62 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013007 ortholog_one2many 1 retrogene
retro_cfam_14,
Callithrix jacchus ENSCJAG00000007198 ortholog_one2one 2 retrogenes
retro_cjac_1029, retro_cjac_2933,
Homo sapiens ENSG00000197894 ortholog_one2one 3 retrogenes
retro_hsap_175, retro_hsap_330, retro_hsap_3607,
Gorilla gorilla ENSGGOG00000028244 ortholog_one2many 2 retrogenes
retro_ggor_2434, retro_ggor_354,
Myotis lucifugus ENSMLUG00000002722 ortholog_one2one 1 retrogene
retro_mluc_1702,
Macaca mulatta ENSMMUG00000003552 ortholog_one2many 1 retrogene
retro_mmul_299,
Mustela putorius furo ENSMPUG00000009642 ortholog_one2one 1 retrogene
retro_mputfur_1625,
Nomascus leucogenys ENSNLEG00000013946 ortholog_one2one 3 retrogenes
retro_nleu_1772, retro_nleu_2636, retro_nleu_983,
Pongo abelii ENSPPYG00000014946 ortholog_one2many 3 retrogenes
retro_pabe_176, retro_pabe_359, retro_pabe_453,
Pan troglodytes ENSPTRG00000016303 ortholog_one2one 3 retrogenes
retro_ptro_166, retro_ptro_2438, retro_ptro_266,
Xenopus tropicalis ENSXETG00000009304 ortholog_one2one 1 retrogene
retro_xtro_57,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_659 89.13 60.96
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Download FASTA sequences of all ENSSSCG00000009185 retrocopies