Parental gene:

APOPT1, ENSCAFG00000030884

Aliases:None
Description:apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:20492]
Organism:Dog (Canis familiaris)
Coordinates:8:71325508..71362025(+)


>ENSCAFG00000030884
ATGAGACCCAGAGGGAGAGGCAGAGACACAGGCAGAGGGAGAAGCAGGCTCCATGCAGGGAGCCCGACGCGGGATCGATC
CCAGGTCTCCAGGTCACGCCCCGGGCTGAAGGTCTCAGGATTCTGCCCTCCGAGAAAATCTTGCCGTGACTGGATAGGAC
CCCCAGATAAACATTCAAACCTTCGACCCATTCACTTTTACATCCCGGAAAGCGAGTCACCGTTGGAACAAAAGCTAAGA
CAATTAAGACAAGAAACACAAGAATGGAACCAACAGTTCTGGGCAAACCAGAATTTGACATTTCGAAAGGAAAAAGAAGA
ATTTATTCACTCAAGACTAAAAGCTAAAGGCTTGGAACTGAGATCTGGATCAGGTCAAAAAGCAACATTAGATGCAGAAG
AAATGGCTGACTTTTACAAGGAATTTTTAAGTAAAAATTTTCAGAAGCACATGTATTATAACAGAGACTGGTACAAGCGT
AATTTTGCCATTACCTTCTTCATGGGAAAAGTGGCCCTGGAGAGAGTTTGGAACAAGCTTAGACCGAAGCATAAGAAGAG
CAGCACCTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 20 .92 RPM
SRP017611_brain 16 .20 RPM
SRP017611_kidney 26 .41 RPM
SRP017611_liver 9 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000019553 ortholog_one2one 5 retrogenes
retro_dnov_1003, retro_dnov_2304, retro_dnov_2391, retro_dnov_441, retro_dnov_777,
Erinaceus europaeus ENSEEUG00000011728 ortholog_one2one 1 retrogene
retro_eeur_107,
Felis catus ENSFCAG00000027939 ortholog_one2one 3 retrogenes
retro_fcat_482, retro_fcat_549, retro_fcat_649,
Microcebus murinus ENSMICG00000009792 ortholog_one2one 1 retrogene
retro_mmur_744,
Mustela putorius furo ENSMPUG00000002350 ortholog_one2many 2 retrogenes
retro_mputfur_1406, retro_mputfur_166,
Otolemur garnettii ENSOGAG00000015416 ortholog_one2one 1 retrogene
retro_ogar_1394,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_396 74.19 80.42
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2. retro_cfam_1514 63.37 53.44
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Download FASTA sequences of all ENSCAFG00000030884 retrocopies