Parental gene: | APOPT1, ENSFCAG00000027939 |
| Aliases: | None |
| Description: | apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:20492] |
| Organism: | Cat (Felis catus) |
| Coordinates: | B3:146512444..146534203(+) |
>ENSFCAG00000027939
ATTACGGTCTCAGGATTCTGCCCTCCAAGAAAATCTTGCCATGATTGGATAGGACCCCCAGACAAACATTCAAACCTTCG
ACCTGTTCATTTTTACGTCCCCGAAAATGAATCACCATTGGAACAAAAGCTACGAAAATTAAGACAAGAAACACAAGAAT
GGAACCAACAGTTTTGGGCAAACCAGAATTTGACATTCTGTCGGGAAAAAGAAGACTTTATTCGCTCAAGACTAAAAGCT
AAAGGCCTGGAACTGAGAACCGGATCAGGTCAGAAAGCAACATTAGATGCAGAAGAAATGGCTGACTTTTACAAGGAATT
TTTAAGTAAAAATTTTCAGAAACACATGTGTTATAACAGAGACTGGTACAAGCGTAATTTTGCCATCACCTTCTTCATGG
GAAAAGTGGCCCTGGAGAGGGTTTGGCACAAGCTGAGACCAAGGCAAAGGAAGACCAGCACTTAG
ATTACGGTCTCAGGATTCTGCCCTCCAAGAAAATCTTGCCATGATTGGATAGGACCCCCAGACAAACATTCAAACCTTCG
ACCTGTTCATTTTTACGTCCCCGAAAATGAATCACCATTGGAACAAAAGCTACGAAAATTAAGACAAGAAACACAAGAAT
GGAACCAACAGTTTTGGGCAAACCAGAATTTGACATTCTGTCGGGAAAAAGAAGACTTTATTCGCTCAAGACTAAAAGCT
AAAGGCCTGGAACTGAGAACCGGATCAGGTCAGAAAGCAACATTAGATGCAGAAGAAATGGCTGACTTTTACAAGGAATT
TTTAAGTAAAAATTTTCAGAAACACATGTGTTATAACAGAGACTGGTACAAGCGTAATTTTGCCATCACCTTCTTCATGG
GAAAAGTGGCCCTGGAGAGGGTTTGGCACAAGCTGAGACCAAGGCAAAGGAAGACCAGCACTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 15 .87 RPM |
| SRP017611_kidney | 31 .33 RPM |
| SRP017611_brain | 12 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000030884 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000019553 | ortholog_one2one | 5 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000011728 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000009792 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000002350 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015416 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_482 | 75.86 | 55.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_549 | 62.41 | 90.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_649 | 74.77 | 67.53 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000027939 retrocopies