Parental gene: | APOPT1, ENSDNOG00000019553 |
| Aliases: | None |
| Description: | apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:20492] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_5303:7813..21061(+) |
>ENSDNOG00000019553
ATGGCGGCCTGGCGGCCCCGGAGGAGGCTTCTTCTCCCGCTTCTGGGCCGCGCTTTCGCCGGCCGCGGCCGCCAGCCGGC
CCCGGAGCGCGGCGCCGAGCGCAGGGAGGCGGCGCCGAGCCGGGTCTCAAGTTCCCACCACGATTGGATAGGACCCCCAG
ATAAATATTCAAACCTTCGACCTGTGCAGTTTTACATCCCTGAGAATGAATCGCCACTGGAACGGAAGCTGAGAGAGCTG
AGACAAGAAACGCAAGAATGGAATCAACGATTCTGGACAAACCAGAATTTGACTTTCAGTAAGGAAAAAGAAGAATTCAT
TCACTCGAGACTAAAGGCCAGAGGCCTGGGCGGGAGCGCTGGATCAGGTCAAAAACCAACACTGAATGCAGAGGAAATGG
CTGAGTTTTACAAGGAATTTTTAAATAAAAATTTCCAGAAGCATATGTATTACAACAGAGGCTGGTACAAGCATAACTTT
GCTGTCACCTTCTTTTTGGGAAAATTGACCCCAAAGAGAATTTGGAAAAAATTTGGACTGAAGCAGAAGAAAACCAGCAG
CTAG
ATGGCGGCCTGGCGGCCCCGGAGGAGGCTTCTTCTCCCGCTTCTGGGCCGCGCTTTCGCCGGCCGCGGCCGCCAGCCGGC
CCCGGAGCGCGGCGCCGAGCGCAGGGAGGCGGCGCCGAGCCGGGTCTCAAGTTCCCACCACGATTGGATAGGACCCCCAG
ATAAATATTCAAACCTTCGACCTGTGCAGTTTTACATCCCTGAGAATGAATCGCCACTGGAACGGAAGCTGAGAGAGCTG
AGACAAGAAACGCAAGAATGGAATCAACGATTCTGGACAAACCAGAATTTGACTTTCAGTAAGGAAAAAGAAGAATTCAT
TCACTCGAGACTAAAGGCCAGAGGCCTGGGCGGGAGCGCTGGATCAGGTCAAAAACCAACACTGAATGCAGAGGAAATGG
CTGAGTTTTACAAGGAATTTTTAAATAAAAATTTCCAGAAGCATATGTATTACAACAGAGGCTGGTACAAGCATAACTTT
GCTGTCACCTTCTTTTTGGGAAAATTGACCCCAAAGAGAATTTGGAAAAAATTTGGACTGAAGCAGAAGAAAACCAGCAG
CTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 6 .61 RPM |
| SRP012922_cerebellum | 8 .39 RPM |
| SRP012922_heart | 4 .64 RPM |
| SRP012922_kidney | 4 .38 RPM |
| SRP012922_liver | 2 .01 RPM |
| SRP012922_lung | 3 .82 RPM |
| SRP012922_quadricep_muscle | 8 .48 RPM |
| SRP012922_spleen | 4 .24 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000030884 | ortholog_one2one | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000011728 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000027939 | ortholog_one2one | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000009792 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000002350 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015416 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_441 | 66.48 | 95.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_777 | 71.65 | 66.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1003 | 70.91 | 85.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_2304 | 69.52 | 98.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_2391 | 73.98 | 64.71 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000019553 retrocopies