Parental gene:

APOPT1, ENSEEUG00000011728

Aliases:None
Description:apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:20492]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_3321:5175..11963(+)


>ENSEEUG00000011728
CCAGTTCCTTTTTACATTCCTGACAATGAGTTGCCATTGCAAAAGCTAAAACAATCAAGAGAAACACAAGAATGGAACCA
AATGTTCTGGGAAAACCAAAATTTGACTTTTAGTAAGGAAAAAGAAGAATTTATTCACTCAAGACTAAAAGCTAAAGGCC
TGGGACTAAGAGCTGAATCAGGTCAAAAAGCAACACTGAGTGCGGACGAAATGGCTGACTTTTACAAGGAATTTCTAAGT
AAAAATTTTCAGAAGCACATGTATAATAAGAGAGACTGGTACAAGCGCAATTTTGCCATCACCTTCTTCATGGGGAAAGT
GGCTCTGGAAAGGATATGGAACAAGCTTCGACCTAAGCCAAGGAAGACCGGCAACTAG

Library Parental gene expression (RPM)
SRP017611_liver 5 .63 RPM
SRP017611_kidney 9 .00 RPM
SRP017611_brain 8 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000030884 ortholog_one2one 2 retrogenes
retro_cfam_1514, retro_cfam_396,
Dasypus novemcinctus ENSDNOG00000019553 ortholog_one2one 5 retrogenes
retro_dnov_1003, retro_dnov_2304, retro_dnov_2391, retro_dnov_441, retro_dnov_777,
Felis catus ENSFCAG00000027939 ortholog_one2one 3 retrogenes
retro_fcat_482, retro_fcat_549, retro_fcat_649,
Microcebus murinus ENSMICG00000009792 ortholog_one2one 1 retrogene
retro_mmur_744,
Mustela putorius furo ENSMPUG00000002350 ortholog_one2many 2 retrogenes
retro_mputfur_1406, retro_mputfur_166,
Otolemur garnettii ENSOGAG00000015416 ortholog_one2one 1 retrogene
retro_ogar_1394,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_107 79.35 70.40
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Download FASTA sequences of all ENSEEUG00000011728 retrocopies