Parental gene: | ZCCHC9, ENSCHOG00000005268 |
| Aliases: | None |
| Description: | zinc finger, CCHC domain containing 9 [Source:HGNC Symbol;Acc:25424] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_50427:1038..7734(-) |
>ENSCHOG00000005268
ATGACTAGGTGGGCACGAGCCACTACCACACATAACAAGAGACCCTTGCCTGCAACATCATGGGAAGACATGAAAAAGGG
ATCCTTTGAGGGTACAAGCCAAAGCCTACCAAGGGATAAACAGCTTGAGGCCAATAGGCTGGCTCTTAAAAATGTTGCAC
CCCAGACAAAACACAAAAAGAACAAAAAGAAAAAGGAGTACCTAAATGAGGATGTGAATGGATTCATGGAATACCTAAGA
CAGAACTCACAGATGGCTCAAAATGGGGTGATGATAGCAACAGACAGCCAGGAAGTAAGGGAAGAAATTGCAATTGCTTT
AAAAAAAGACAGTCGACGGGAAGGAAGAAGATTAAAAAGACAGGCAGCAAAGAAAAATGCAATGGTATGTTTCCATTGTA
GAAAACCTGGCCATGGGATTGCAGATTGCCCGGCTGCCCTTGAGAATCAAGATATGGGCACCGGAATATGTTACCGGTGT
GGTTCCACGGAGCATGAAATAACCAAGTGCAAGGCTAAAGTAGACCCAGCTCTTGGTGAATTTCCTTTTGCAAAATGTTT
TGTTTGTGGTGAAATGGGACACTTGTCCAGATCTTGTCCTGATAACCCCAAAGGACTCTATGCTGATGGTGGTTGCTGCA
GACTTTGTGGCTCGGTGGAACATTTTAAGAAAGATTGCCCTGAGAGTCAGAGTTCAGATCGAATGGTCACAGTTGGTCGC
TGGGCAAAGGGAATGAGTGCAGACTATGAAGAAATTTTGGATATTCCTAAACCACAGAAACCCAAAACAAAGACACCTAA
AGTTGTTAATTTTTGA
ATGACTAGGTGGGCACGAGCCACTACCACACATAACAAGAGACCCTTGCCTGCAACATCATGGGAAGACATGAAAAAGGG
ATCCTTTGAGGGTACAAGCCAAAGCCTACCAAGGGATAAACAGCTTGAGGCCAATAGGCTGGCTCTTAAAAATGTTGCAC
CCCAGACAAAACACAAAAAGAACAAAAAGAAAAAGGAGTACCTAAATGAGGATGTGAATGGATTCATGGAATACCTAAGA
CAGAACTCACAGATGGCTCAAAATGGGGTGATGATAGCAACAGACAGCCAGGAAGTAAGGGAAGAAATTGCAATTGCTTT
AAAAAAAGACAGTCGACGGGAAGGAAGAAGATTAAAAAGACAGGCAGCAAAGAAAAATGCAATGGTATGTTTCCATTGTA
GAAAACCTGGCCATGGGATTGCAGATTGCCCGGCTGCCCTTGAGAATCAAGATATGGGCACCGGAATATGTTACCGGTGT
GGTTCCACGGAGCATGAAATAACCAAGTGCAAGGCTAAAGTAGACCCAGCTCTTGGTGAATTTCCTTTTGCAAAATGTTT
TGTTTGTGGTGAAATGGGACACTTGTCCAGATCTTGTCCTGATAACCCCAAAGGACTCTATGCTGATGGTGGTTGCTGCA
GACTTTGTGGCTCGGTGGAACATTTTAAGAAAGATTGCCCTGAGAGTCAGAGTTCAGATCGAATGGTCACAGTTGGTCGC
TGGGCAAAGGGAATGAGTGCAGACTATGAAGAAATTTTGGATATTCCTAAACCACAGAAACCCAAAACAAAGACACCTAA
AGTTGTTAATTTTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005265 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000008703 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000019486 | ortholog_one2one | 4 retrogenes | |
| Echinops telfairi | ENSETEG00000003838 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000131732 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013790 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000016266 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001886 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020655 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000021621 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002543 | ortholog_one2many | 6 retrogenes | |
| Pongo abelii | ENSPPYG00000015604 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017047 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000014927 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000008580 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000014504 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001407 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000012423 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000013796 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_140 | 85.24 | 99.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_268 | 79.17 | 52.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_2143 | 81.77 | 66.79 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000005268 retrocopies