Parental gene:

ENSOGAG00000002543

Aliases:None
Description:None
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873536.1:15273918..15286485(+)


>ENSOGAG00000002543
ATGACTCGGTGGGCACGCGTTACTACCACACGGAGTAAGAGACCCTTGTCTGCAACATCATGGGAGGACATGAAGAAGCA
GTCCTTTGAGGGGACAAGCCAGAACCTACCAAAGCATAAACACATCGGAACCAGTAGGCTATCCCTTAAAAATGATGCAC
CCCAAGCAAAACAGAAAAAGAACAAAAAGAAAAAAGAATACTTAAACGAAGATGTGAATGGATTCATGGACTACCTAAGA
CAGAACTCACAGATGGTTCACAATGGGGAGATTATAGCATCAGACGTTCAGGAAGTAAGGGAAGAAATTGCAGTTGCTTT
AAAGAAAGACAGTCGACGGGAAGGGAGACGATTAAAAAGACAAGCAGCAAAGAAAAATGCGATGGTATGTTTCCATTGTA
GAAAACCTGGTCATGGAATTGCAGATTGCCCAGCCGCCCTTGAAAATCAAGATATGGGCACTGGAATATGTTACCGGTGT
GGGTCCACAGAGCATGAAATAACCAAGTGCAAGGCTAAAGTAGACCCAGCTTTTGGTGAATTTCCTTTTGCAAAGTGTTT
TGTTTGTGGGGAAATGGGACACCTGTCTAGATCGTGTCCTGATAATCCCAAAGGACTCTATGCTGATGGTGGTGGTTGCA
AACTTTGTGGCTCTGTGAAACACTTAAAGAAAGATTGCCCTGAGAGTCAGAATTCAGATCAAATGGTCACCGTTGGTCGC
TGGGCAAAGGGAATGAGTGCAGACTATGAAGAAATCTTGGATGCACCCAAACCACAGAAACCCAAAACAAAGATCCCTAA
AATTGTTAAATTTTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005265 ortholog_many2many 1 retrogene
retro_btau_1095,
Canis familiaris ENSCAFG00000008703 ortholog_one2many 2 retrogenes
retro_cfam_1547, retro_cfam_675,
Choloepus hoffmanni ENSCHOG00000005268 ortholog_one2many 3 retrogenes
retro_chof_140, retro_chof_2143, retro_chof_268,
Callithrix jacchus ENSCJAG00000019486 possible_ortholog 4 retrogenes
retro_cjac_1236, retro_cjac_2906, retro_cjac_3528, retro_cjac_909,
Echinops telfairi ENSETEG00000003838 ortholog_one2many 2 retrogenes
retro_etel_325, retro_etel_880,
Homo sapiens ENSG00000131732 possible_ortholog 1 retrogene
retro_hsap_1799,
Gorilla gorilla ENSGGOG00000013790 possible_ortholog 1 retrogene
retro_ggor_706,
Microcebus murinus ENSMICG00000016266 ortholog_one2many 5 retrogenes
retro_mmur_125, retro_mmur_1325, retro_mmur_1341, retro_mmur_606, retro_mmur_819,
Myotis lucifugus ENSMLUG00000001886 ortholog_one2many 1 retrogene
retro_mluc_799,
Macaca mulatta ENSMMUG00000020655 possible_ortholog 1 retrogene
retro_mmul_797,
Mus musculus ENSMUSG00000021621 ortholog_one2many 1 retrogene
retro_mmus_1920,
Pongo abelii ENSPPYG00000015604 possible_ortholog 1 retrogene
retro_pabe_1476,
Pan troglodytes ENSPTRG00000017047 possible_ortholog 2 retrogenes
retro_ptro_1205, retro_ptro_602,
Rattus norvegicus ENSRNOG00000014927 ortholog_one2many 2 retrogenes
retro_rnor_1164, retro_rnor_2160,
Sorex araneus ENSSARG00000008580 ortholog_one2many 2 retrogenes
retro_sara_216, retro_sara_78,
Sarcophilus harrisii ENSSHAG00000014504 ortholog_one2many 1 retrogene
retro_shar_734,
Ictidomys tridecemlineatus ENSSTOG00000001407 ortholog_one2many 2 retrogenes
retro_itri_422, retro_itri_696,
Tarsius syrichta ENSTSYG00000012423 ortholog_one2many 1 retrogene
retro_tsyr_244,
Tursiops truncatus ENSTTRG00000013796 ortholog_one2many 1 retrogene
retro_ttru_819,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_459 85.21 62.36
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2. retro_ogar_1467 75.48 76.01
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3. retro_ogar_2125 81.38 69.00
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4. retro_ogar_2426 80.53 69.37
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5. retro_ogar_2941 76.38 99.26
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6. retro_ogar_3076 84.05 93.73
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Download FASTA sequences of all ENSOGAG00000002543 retrocopies