Parental gene:

MMU.2431, ENSMMUG00000020655

Aliases:None
Description:zinc finger, CCHC domain containing 9 [Source:RefSeq peptide;Acc:NP_001182668]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:77483117..77494302(+)


>ENSMMUG00000020655
ATGACCAGGTGGGCCCGAGTTAGTACCACATGTAACAAGAGACCCTTGCCTGCAACATCATGGGAGGACATGAAGAAGGG
ATCCTTTGAGGGAACAAGCCAAAACCTACCAAAGCATAAACAACTTGAAGCCAATAGGCTATCCCTCAAAAATGATGCAT
CCCAAGCAAAACATAAAAAGAAAAAGAAAAAGGAGTACTTAAATGAAGATGTGAATGGATTCATGGAATACCTAAGACAG
AATTCACAGATGGTTCACAATGGGCAAATTGTAGCAACAGACAGTGAGGAAGTAAGGGAAGAAATTGCAGTTGCTTTAAA
GAAAGACAGTCGACGGGAAGGAAGAAGATTAAAAAGACAAGCGGCAAAGAAAAATGCAATGGTGTGTTTCCATTGTAGAA
AACCTGGTCATGGAATTGCAGATTGCCCTGCCGCCCTTGAAAATCAAGACATGGGCACTGGGATATGTTACAGGTGTGGG
TCCACAGAGCACGAAATAACCAAGTGTAAGGCTAAAGTAGACCCAGCTCTTGGCGAATTTCCTTTTGCAAAATGTTTTGT
TTGTGGAGAAATGGGGCACCTGTCTAGATCTTGTCCGGATAATCCCAAAGGCCTCTATGCTGATGGTGGCGGCTGCAAAC
TTTGTGGCTCTGTGGAACATTTAAAGAAAGATTGCCCTGAAAGTCAGAATTCAGAGCGAATGGTCACAGTTGGTCGCTGG
GCAAAGGGAATGAGTGCAGACTATGAAGAAATTTTGGATGCACCTAAACCACAAAAACCCAAAACAAAAATACCTAAAGT
TGTTAATTTTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 9 .84 RPM
SRP007412_brain 10 .98 RPM
SRP007412_cerebellum 13 .75 RPM
SRP007412_heart 12 .72 RPM
SRP007412_kidney 21 .36 RPM
SRP007412_liver 3 .17 RPM
SRP007412_testis 11 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005265 ortholog_many2many 1 retrogene
retro_btau_1095,
Canis familiaris ENSCAFG00000008703 ortholog_one2many 2 retrogenes
retro_cfam_1547, retro_cfam_675,
Choloepus hoffmanni ENSCHOG00000005268 ortholog_one2many 3 retrogenes
retro_chof_140, retro_chof_2143, retro_chof_268,
Callithrix jacchus ENSCJAG00000019486 ortholog_one2many 4 retrogenes
retro_cjac_1236, retro_cjac_2906, retro_cjac_3528, retro_cjac_909,
Echinops telfairi ENSETEG00000003838 ortholog_one2many 2 retrogenes
retro_etel_325, retro_etel_880,
Homo sapiens ENSG00000131732 ortholog_one2many 1 retrogene
retro_hsap_1799,
Gorilla gorilla ENSGGOG00000013790 ortholog_one2many 1 retrogene
retro_ggor_706,
Microcebus murinus ENSMICG00000016266 possible_ortholog 5 retrogenes
retro_mmur_125, retro_mmur_1325, retro_mmur_1341, retro_mmur_606, retro_mmur_819,
Myotis lucifugus ENSMLUG00000001886 ortholog_one2many 1 retrogene
retro_mluc_799,
Mus musculus ENSMUSG00000021621 ortholog_one2many 1 retrogene
retro_mmus_1920,
Otolemur garnettii ENSOGAG00000002543 possible_ortholog 6 retrogenes
retro_ogar_1467, retro_ogar_2125, retro_ogar_2426, retro_ogar_2941, retro_ogar_3076, retro_ogar_459,
Pongo abelii ENSPPYG00000015604 ortholog_one2many 1 retrogene
retro_pabe_1476,
Pan troglodytes ENSPTRG00000017047 ortholog_one2many 2 retrogenes
retro_ptro_1205, retro_ptro_602,
Rattus norvegicus ENSRNOG00000014927 ortholog_one2many 2 retrogenes
retro_rnor_1164, retro_rnor_2160,
Sorex araneus ENSSARG00000008580 ortholog_one2many 2 retrogenes
retro_sara_216, retro_sara_78,
Sarcophilus harrisii ENSSHAG00000014504 ortholog_one2many 1 retrogene
retro_shar_734,
Ictidomys tridecemlineatus ENSSTOG00000001407 ortholog_one2many 2 retrogenes
retro_itri_422, retro_itri_696,
Tarsius syrichta ENSTSYG00000012423 possible_ortholog 1 retrogene
retro_tsyr_244,
Tursiops truncatus ENSTTRG00000013796 ortholog_one2many 1 retrogene
retro_ttru_819,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_797 86.86 100.00
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Download FASTA sequences of all ENSMMUG00000020655 retrocopies