Parental gene: | RPL12, ENSDNOG00000008412 |
| Aliases: | None |
| Description: | ribosomal protein L12 [Source:HGNC Symbol;Acc:10302] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3318:258988..262415(-) |
>ENSDNOG00000008412
ATGCCGCCCAAGTTCGACCCCAACGAGATCAAAGTCGTGTACCTGAGGTGCACCGGTGGGGAAGTCGGTGCCACATCTGC
CCTGGCCCCCAAGATCGGCCCCCTCGGTCTGTCTCCAAAAAAGGTTGGTGATGACATTGCCAAGGCAACTGGTGACTGGA
AAGGTCTAAGGATTACAGTGAAACTGACCATCCAGAACAGACAGGCCCAGATCGAGGTGGTACCTTCTGCCTCTGCCCTG
ATCATCAAAGCCCTTAAGGAACCACCAAGAGACAGGAAGAAGCAGAAAAACATTAAGCACAGTGGAAATATCACTTTTGA
TGAGATCGTCAGCATTGCTCGACAGATGCGGCACCGATCTTTAGCCAGAGAACTCTCTGGAACCATTAAAGAGATTCTGG
GGACTGCCCAGTCTGTGGGCTGCAATGTGGATGGCCGCCACCCTCATGACATCATAGATGACATCAACAGTGGTGCAGTG
GAATGCCCAGCTAGTTAA
ATGCCGCCCAAGTTCGACCCCAACGAGATCAAAGTCGTGTACCTGAGGTGCACCGGTGGGGAAGTCGGTGCCACATCTGC
CCTGGCCCCCAAGATCGGCCCCCTCGGTCTGTCTCCAAAAAAGGTTGGTGATGACATTGCCAAGGCAACTGGTGACTGGA
AAGGTCTAAGGATTACAGTGAAACTGACCATCCAGAACAGACAGGCCCAGATCGAGGTGGTACCTTCTGCCTCTGCCCTG
ATCATCAAAGCCCTTAAGGAACCACCAAGAGACAGGAAGAAGCAGAAAAACATTAAGCACAGTGGAAATATCACTTTTGA
TGAGATCGTCAGCATTGCTCGACAGATGCGGCACCGATCTTTAGCCAGAGAACTCTCTGGAACCATTAAAGAGATTCTGG
GGACTGCCCAGTCTGTGGGCTGCAATGTGGATGGCCGCCACCCTCATGACATCATAGATGACATCAACAGTGGTGCAGTG
GAATGCCCAGCTAGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 1076 .57 RPM |
| SRP012922_cerebellum | 317 .55 RPM |
| SRP012922_heart | 351 .06 RPM |
| SRP012922_kidney | 857 .53 RPM |
| SRP012922_liver | 424 .48 RPM |
| SRP012922_lung | 1040 .36 RPM |
| SRP012922_quadricep_muscle | 624 .14 RPM |
| SRP012922_spleen | 1918 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Latimeria chalumnae | ENSLACG00000015373 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000017669 | possible_ortholog | 10 retrogenes | |
| Macropus eugenii | ENSMEUG00000007380 | possible_ortholog | 12 retrogenes | |
| Monodelphis domestica | ENSMODG00000004571 | possible_ortholog | 9 retrogenes | |
| Procavia capensis | ENSPCAG00000007469 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000016220 | possible_ortholog | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000015700 | ortholog_one2one | 15 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_210 | 73.91 | 55.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_231 | 50.86 | 69.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_260 | 60.47 | 76.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_330 | 76.97 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_343 | 88.03 | 70.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_368 | 74.10 | 98.79 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_387 | 83.67 | 87.88 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_dnov_395 | 67.15 | 81.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_dnov_455 | 84.31 | 61.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_dnov_552 | 78.76 | 67.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_dnov_560 | 75.86 | 51.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_dnov_590 | 79.78 | 52.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_dnov_597 | 52.56 | 89.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_dnov_614 | 68.80 | 73.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_dnov_634 | 63.95 | 51.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_dnov_654 | 68.54 | 52.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_dnov_677 | 64.04 | 53.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_dnov_1021 | 68.29 | 72.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_dnov_1039 | 73.95 | 70.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_dnov_1105 | 72.67 | 96.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_dnov_1111 | 78.63 | 78.79 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_dnov_1291 | 77.50 | 71.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_dnov_1292 | 61.87 | 81.82 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_dnov_1339 | 53.21 | 89.09 | Please wait, loading | Please wait, loading | Please wait, loading |
| 25. | retro_dnov_1355 | 78.33 | 71.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 26. | retro_dnov_1383 | 87.64 | 53.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 27. | retro_dnov_1387 | 81.61 | 52.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 28. | retro_dnov_1408 | 72.05 | 96.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 29. | retro_dnov_1636 | 79.78 | 52.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 30. | retro_dnov_1658 | 73.58 | 64.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 31. | retro_dnov_1695 | 63.25 | 68.48 | Please wait, loading | Please wait, loading | Please wait, loading |
| 32. | retro_dnov_1711 | 83.45 | 86.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 33. | retro_dnov_1884 | 63.57 | 82.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 34. | retro_dnov_2053 | 96.97 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 35. | retro_dnov_2055 | 67.42 | 53.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 36. | retro_dnov_2058 | 75.73 | 61.82 | Please wait, loading | Please wait, loading | Please wait, loading |
| 37. | retro_dnov_2165 | 88.82 | 91.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 38. | retro_dnov_2196 | 88.48 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 39. | retro_dnov_2199 | 69.77 | 50.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 40. | retro_dnov_2222 | 69.30 | 67.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 41. | retro_dnov_2370 | 52.07 | 71.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 42. | retro_dnov_2430 | 69.13 | 90.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 43. | retro_dnov_2452 | 74.77 | 63.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 44. | retro_dnov_2485 | 92.12 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 45. | retro_dnov_2490 | 66.38 | 69.70 | Please wait, loading | Please wait, loading | Please wait, loading |
| 46. | retro_dnov_2603 | 77.05 | 72.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 47. | retro_dnov_2637 | 67.77 | 72.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 48. | retro_dnov_2639 | 65.59 | 53.94 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000008412 retrocopies