RetrogeneDB ID: | retro_ttru_1449 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_113540:132864..133333(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL12 | ||
Ensembl ID: | ENSTTRG00000015700 | ||
Aliases: | None | ||
Description: | ribosomal protein L12 [Source:HGNC Symbol;Acc:10302] |
Percent Identity: | 67.3 % |
Parental protein coverage: | 94.55 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MPPKFDPNEIK-VVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQA |
M..KF.PN.IK...YLRC...E...TSALA..I.PL.LSPKK.G..I.KAT.D.KGLRI.V.L.I.NRQA | |
Retrocopy | MSLKFNPNKIKSCMYLRCLSREIDTTSALATNICPLSLSPKKLGGGITKATSDMKGLRIIVDLPI*NRQA |
Parental | QIEVVPSASALIIKALKEPPRD-RKKQKNIKHSGNITFDEIVSIARQMRHRSLARELSGTIKEILGTAQS |
QIEVVPS.S.L.IKALKEPPRD.RK..KNIKH.GNIT..EIV....QM.H..LAR.LSGTI.EILGTAQ. | |
Retrocopy | QIEVVPSTSTLTIKALKEPPRD<RKESKNIKHIGNITVEEIVNFV*QMWHGRLARKLSGTIQEILGTAQC |
Parental | V-GCNVDGRHPHDIIDDIN |
..GC.VDG.H.HD.IDDIN | |
Retrocopy | M<GCSVDGHHRHDVIDDIN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |