RetrogeneDB ID: | retro_ttru_187 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1513:69414..69908(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL12 | ||
Ensembl ID: | ENSTTRG00000015700 | ||
Aliases: | None | ||
Description: | ribosomal protein L12 [Source:HGNC Symbol;Acc:10302] |
Percent Identity: | 87.95 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQ |
MPPKFDPNEIKV.YLRCTGG.VGA.SALAPKIGPL.LSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQ | |
Retrocopy | MPPKFDPNEIKVMYLRCTGGAVGAMSALAPKIGPLDLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQ |
Parental | IEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVSIARQMRHRSLARELSGTIKEILGTAQSVG |
.EVVPSASAL.IKALKE.PR..KKQKNIK.SGN.TFDEIV.IARQMRH.SLARELSGTIKEILG..QSVG | |
Retrocopy | FEVVPSASALMIKALKESPREKKKQKNIKYSGNMTFDEIVNIARQMRHQSLARELSGTIKEILGATQSVG |
Parental | CNVDGRHPHDIIDDI-NSGAVECPAS |
C.VDGRHPH.IIDDI..SG.VECPAS | |
Retrocopy | CSVDGRHPHNIIDDI<HSGVVECPAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |