RetrogeneDB ID: | retro_pcap_306 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_30424:10918..11160(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL12 | ||
Ensembl ID: | ENSPCAG00000007469 | ||
Aliases: | None | ||
Description: | ribosomal protein L12 [Source:HGNC Symbol;Acc:10302] |
Percent Identity: | 52.44 % |
Parental protein coverage: | 52.63 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | YLRCTGGEVGATSALA-PKIGPLGLSPKKV-GDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPSASALI |
YLRC..GE...T..LA.PK.....L.PKKV.GDDI.KA...WK..RI.VKLTI.NR....EVVP.A..L. | |
Retrocopy | YLRCACGEIEVTTTLA>PKSSSPSLFPKKV>GDDIVKAISNWKIPRIMVKLTI*NR*TRMEVVPLAICLD |
Parental | IKALKEPPRDRK |
...L..PPR... | |
Retrocopy | HQSLRLPPRQKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |