Parental gene:

RPL12, ENSTTRG00000015700

Aliases:None
Description:ribosomal protein L12 [Source:HGNC Symbol;Acc:10302]
Organism:Dolphin (Tursiops truncatus)
Coordinates:GeneScaffold_1469:169438..173214(-)


>ENSTTRG00000015700
ATGCCGCCTAAGTTCGACCCCAACGAGATCAAAGTCGTGTACCTGAGGTGCACCGGTGGGGAAGTCGGTGCCACGTCTGC
CCTGGCCCCCAAGATCGGCCCCCTGGGTCTGTCTCCAAAAAAAGTTGGTGATGACATCGCCAAGGCAACTGGTGATTGGA
AGGGTCTGAGGATTACAGTGAAACTGACCATTCAGAACCGACAGGCCCAGATTGAGGTGGTACCTTCTGCCTCTGCCCTG
ATCATCAAAGCCCTCAAGGAACCGCCAAGAGACAGAAAGAAGCAGAAAAACATTAAGCACAGTGGAAACATCACTTTTGA
TGAAATTGTCAGCATTGCCCGACAGATGCGGCATCGATCTTTAGCTAGAGAACTCTCTGGAACCATTAAAGAGATCCTGG
GGACCGCCCAGTCTGTGGGCTGCAATGTTGATGGCCGCCACCCTCACGACATCATAGATGACATCAACAGTGGTGCAGTG
GAATGTCCAGCTAGTTAA

Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000008412 ortholog_one2one 48 retrogenes
retro_dnov_1021, retro_dnov_1039, retro_dnov_1105, retro_dnov_1111, retro_dnov_1291, retro_dnov_1292, retro_dnov_1339, retro_dnov_1355, retro_dnov_1383, retro_dnov_1387, retro_dnov_1408, retro_dnov_1636, retro_dnov_1658, retro_dnov_1695, retro_dnov_1711, retro_dnov_1884, retro_dnov_2053, retro_dnov_2055, retro_dnov_2058, retro_dnov_210, retro_dnov_2165, retro_dnov_2196, retro_dnov_2199, retro_dnov_2222, retro_dnov_231, retro_dnov_2370, retro_dnov_2430, retro_dnov_2452, retro_dnov_2485, retro_dnov_2490, retro_dnov_260, retro_dnov_2603, retro_dnov_2637, retro_dnov_2639, retro_dnov_330, retro_dnov_343, retro_dnov_368, retro_dnov_387, retro_dnov_395, retro_dnov_455, retro_dnov_552, retro_dnov_560, retro_dnov_590, retro_dnov_597, retro_dnov_614, retro_dnov_634, retro_dnov_654, retro_dnov_677,
Latimeria chalumnae ENSLACG00000015373 ortholog_one2one 3 retrogenes
retro_lcha_31, retro_lcha_87, retro_lcha_92,
Loxodonta africana ENSLAFG00000017669 possible_ortholog 10 retrogenes
retro_lafr_1, retro_lafr_193, retro_lafr_204, retro_lafr_286, retro_lafr_342, retro_lafr_41, retro_lafr_8, retro_lafr_802, retro_lafr_830, retro_lafr_984,
Macropus eugenii ENSMEUG00000007380 possible_ortholog 12 retrogenes
retro_meug_1102, retro_meug_1107, retro_meug_1199, retro_meug_1357, retro_meug_1426, retro_meug_1611, retro_meug_1634, retro_meug_1691, retro_meug_1953, retro_meug_265, retro_meug_479, retro_meug_493,
Monodelphis domestica ENSMODG00000004571 possible_ortholog 9 retrogenes
retro_mdom_1061, retro_mdom_1177, retro_mdom_1192, retro_mdom_1526, retro_mdom_1719, retro_mdom_1871, retro_mdom_1947, retro_mdom_309, retro_mdom_925,
Procavia capensis ENSPCAG00000007469 ortholog_one2one 3 retrogenes
retro_pcap_135, retro_pcap_253, retro_pcap_306,
Rattus norvegicus ENSRNOG00000016220 possible_ortholog 4 retrogenes
retro_rnor_166, retro_rnor_236, retro_rnor_247, retro_rnor_312,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_65 73.38 83.64
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2. retro_ttru_187 87.95 100.00
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3. retro_ttru_342 69.40 80.61
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4. retro_ttru_421 86.32 70.91
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5. retro_ttru_536 67.27 65.45
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6. retro_ttru_774 93.52 65.45
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7. retro_ttru_1215 73.39 64.85
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8. retro_ttru_1328 85.98 99.39
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9. retro_ttru_1356 84.34 100.00
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10. retro_ttru_1373 76.77 93.33
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11. retro_ttru_1390 80.12 100.00
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12. retro_ttru_1449 67.30 94.55
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13. retro_ttru_1685 75.53 56.36
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14. retro_ttru_1847 62.11 56.97
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15. retro_ttru_1942 90.30 100.00
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Download FASTA sequences of all ENSTTRG00000015700 retrocopies