RetrogeneDB ID: | retro_ttru_65 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1103:147037..147449(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL12 | ||
Ensembl ID: | ENSTTRG00000015700 | ||
Aliases: | None | ||
Description: | ribosomal protein L12 [Source:HGNC Symbol;Acc:10302] |
Percent Identity: | 73.38 % |
Parental protein coverage: | 83.64 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | LAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLT-IQNRQAQIEVVPSASALIIKALKEPPRDRKKQK |
L...I..LGLSPKK.G......TGDWKGLR..VKLT.IQNRQ.Q.E.VPSASALIIKA.KE.PRDRKKQ. | |
Retrocopy | LTTEIISLGLSPKKFG**YCLVTGDWKGLRMSVKLT>IQNRQGQTEEVPSASALIIKAFKEWPRDRKKQ- |
Parental | NIKHSGNITFDEIVSIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECPAS |
NIKHSG...FDEI..IA.Q..H..LA.ELSGTIKEI.GTAQ.V.CNVDG.HPHDI.DDINSGAVECPAS | |
Retrocopy | NIKHSGHTIFDEIANIAQQLWHLFLAQELSGTIKEIPGTAQLVDCNVDGCHPHDIMDDINSGAVECPAS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |