Parental gene: | DPPA2, ENSDNOG00000010745 |
| Aliases: | None |
| Description: | developmental pluripotency associated 2 [Source:HGNC Symbol;Acc:19197] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_4973:3906..10198(-) |
>ENSDNOG00000010745
AATGTTGTTGAGGAGGAATTAGATGAGGAATATGTAATAATCACATTAGTTCCAGTAAAAGAAGAACCTCAAGAGGAGCA
TCAAATGGAACCAAGTACTTCAACTGCAGAAGTTAAAGTAAAGAAGTCTAGGAAAAAGGATAAAGTTCATCTTCCTGAAA
TGAATGAGCAATTCAAAGCTTGCTCAAAACCTGGTTATAAAGAACCAGTGCTTCCCTTGCCAACCATTTTGCCTCCAGTT
AATAAGATACATCGGAACACTCTGCGGAAGTGGTGCCAACAATTTAATTTGAGTACCGATGGCCAGAAAATAGAGGTTTA
TCTGAGGCTCCAGCAACATGCTTATCCTGAGCAAAAACAGGATATTCCTGACACACCACAGGAGGCCAAGCTGCAGTCAT
GCACAAAGAGATGCAAGGCGGCCAAGGATCAGAAAAGTTGTAAGAAAAGGGAGAAAGAGGAAGTGACTAATACAGTTGAA
GTGATAAGTTCGGCTCAGGAGGCAATATTGGCATCATGGACAAGAATTGCTGCAAGAGCAGCTCAGCCGAAGACTGTGAA
TTCATGTCCCATTCCTACTTCTGTTGAGACTTTCTTGCTGCAAGCCTCTGGTGTCAGATGGTGTGTGGTCCATGGCAGAG
TTCTCCCTGCAGACACAAAGGGTTGGGTTCGCCTGCAGTTCCACGCAGGGCAGGTCTGGGTGCCTGACACTCCTAAGAGG
ATGATCTCTCTCTTCCTGTTACCAGCCTGCACTTTCCCATCTGCAGATGTAGAAGATAATATGCTGTGCCCTGACTGTGT
GAAGAGGAATAAGAAATTAATGAAAAGATTAATTATAATAGGGAAGGAA
AATGTTGTTGAGGAGGAATTAGATGAGGAATATGTAATAATCACATTAGTTCCAGTAAAAGAAGAACCTCAAGAGGAGCA
TCAAATGGAACCAAGTACTTCAACTGCAGAAGTTAAAGTAAAGAAGTCTAGGAAAAAGGATAAAGTTCATCTTCCTGAAA
TGAATGAGCAATTCAAAGCTTGCTCAAAACCTGGTTATAAAGAACCAGTGCTTCCCTTGCCAACCATTTTGCCTCCAGTT
AATAAGATACATCGGAACACTCTGCGGAAGTGGTGCCAACAATTTAATTTGAGTACCGATGGCCAGAAAATAGAGGTTTA
TCTGAGGCTCCAGCAACATGCTTATCCTGAGCAAAAACAGGATATTCCTGACACACCACAGGAGGCCAAGCTGCAGTCAT
GCACAAAGAGATGCAAGGCGGCCAAGGATCAGAAAAGTTGTAAGAAAAGGGAGAAAGAGGAAGTGACTAATACAGTTGAA
GTGATAAGTTCGGCTCAGGAGGCAATATTGGCATCATGGACAAGAATTGCTGCAAGAGCAGCTCAGCCGAAGACTGTGAA
TTCATGTCCCATTCCTACTTCTGTTGAGACTTTCTTGCTGCAAGCCTCTGGTGTCAGATGGTGTGTGGTCCATGGCAGAG
TTCTCCCTGCAGACACAAAGGGTTGGGTTCGCCTGCAGTTCCACGCAGGGCAGGTCTGGGTGCCTGACACTCCTAAGAGG
ATGATCTCTCTCTTCCTGTTACCAGCCTGCACTTTCCCATCTGCAGATGTAGAAGATAATATGCTGTGCCCTGACTGTGT
GAAGAGGAATAAGAAATTAATGAAAAGATTAATTATAATAGGGAAGGAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 0 .00 RPM |
| SRP012922_cerebellum | 0 .00 RPM |
| SRP012922_heart | 0 .00 RPM |
| SRP012922_kidney | 0 .00 RPM |
| SRP012922_liver | 0 .00 RPM |
| SRP012922_lung | 0 .00 RPM |
| SRP012922_quadricep_muscle | 0 .00 RPM |
| SRP012922_spleen | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020460 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020168 | ortholog_one2one | 4 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000008944 | ortholog_one2one | 4 retrogenes | |
| Echinops telfairi | ENSETEG00000007985 | ortholog_one2one | 4 retrogenes | |
| Homo sapiens | ENSG00000163530 | ortholog_one2one | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000013744 | ortholog_one2one | 6 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007444 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022112 | ortholog_one2many | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000018083 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000072419 | ortholog_one2one | 7 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004020 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003175 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000031228 | ortholog_one2many | 7 retrogenes | |
| Ochotona princeps | ENSOPRG00000005059 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013566 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000015199 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017398 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000006212 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009500 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1248 | 94.70 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1626 | 75.00 | 54.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1714 | 75.95 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_2462 | 94.94 | 55.83 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_2583 | 66.47 | 58.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_2656 | 78.95 | 65.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000010745 retrocopies