Parental gene: | RPL18, ENSG00000063177 |
| Aliases: | RPL18, L18 |
| Description: | ribosomal protein L18 [Source:HGNC Symbol;Acc:10310] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 19:49118584..49122793(-) |
>ENSG00000063177
ATGGGAGTGGACATCCGCCATAACAAGGACCGAAAGGTTCGGCGCAAGGAGCCCAAGAGCCAGGATATCTACCTGAGGCT
GTTGGTCAAGTTATACAGGTTTCTGGCCAGAAGAACCAACTCCACATTCAACCAGGTTGTGTTGAAGAGGTTGTTTATGA
GTCGCACCAACCGGCCGCCTCTGTCCCTTTCCCGGATGATCCGGAAGATGAAGCTTCCTGGCCGGGAAAACAAGACGGCC
GTGGTTGTGGGGACCATAACTGATGATGTGCGGGTTCAGGAGGTACCCAAACTGAAGGTATGTGCACTGCGCGTGACCAG
CCGGGCCCGCAGCCGCATCCTCAGGGCAGGGGGCAAGATCCTCACTTTCGACCAGCTGGCCCTGGACTCCCCTAAGGGCT
GTGGCACTGTCCTGCTCTCCGGTCCTCGCAAGGGCCGAGAGGTGTACCGGCATTTCGGCAAGGCCCCAGGAACCCCGCAC
AGCCACACCAAACCCTACGTCCGCTCCAAGGGCCGGAAGTTCGAGCGTGCCAGAGGCCGACGGGCCAGCCGAGGCTACAA
AAACTAA
ATGGGAGTGGACATCCGCCATAACAAGGACCGAAAGGTTCGGCGCAAGGAGCCCAAGAGCCAGGATATCTACCTGAGGCT
GTTGGTCAAGTTATACAGGTTTCTGGCCAGAAGAACCAACTCCACATTCAACCAGGTTGTGTTGAAGAGGTTGTTTATGA
GTCGCACCAACCGGCCGCCTCTGTCCCTTTCCCGGATGATCCGGAAGATGAAGCTTCCTGGCCGGGAAAACAAGACGGCC
GTGGTTGTGGGGACCATAACTGATGATGTGCGGGTTCAGGAGGTACCCAAACTGAAGGTATGTGCACTGCGCGTGACCAG
CCGGGCCCGCAGCCGCATCCTCAGGGCAGGGGGCAAGATCCTCACTTTCGACCAGCTGGCCCTGGACTCCCCTAAGGGCT
GTGGCACTGTCCTGCTCTCCGGTCCTCGCAAGGGCCGAGAGGTGTACCGGCATTTCGGCAAGGCCCCAGGAACCCCGCAC
AGCCACACCAAACCCTACGTCCGCTCCAAGGGCCGGAAGTTCGAGCGTGCCAGAGGCCGACGGGCCAGCCGAGGCTACAA
AAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 112 .25 RPM |
| bodymap2_lung | 363 .01 RPM |
| bodymap2_breast | 241 .23 RPM |
| bodymap2_adipose | 316 .91 RPM |
| bodymap2_adrenal | 431 .64 RPM |
| bodymap2_skeletal_muscle | 170 .40 RPM |
| bodymap2_thyroid | 247 .40 RPM |
| bodymap2_prostate | 466 .05 RPM |
| bodymap2_colon | 423 .24 RPM |
| bodymap2_testis | 226 .92 RPM |
| bodymap2_brain | 71 .45 RPM |
| bodymap2_heart | 78 .72 RPM |
| bodymap2_white_blood_cells | 482 .53 RPM |
| bodymap2_lymph_node | 394 .22 RPM |
| bodymap2_ovary | 633 .30 RPM |
| bodymap2_kidney | 148 .40 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009140 | ortholog_one2one | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000000377 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000008652 | possible_ortholog | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024878 | possible_ortholog | 7 retrogenes | |
| Macropus eugenii | ENSMEUG00000000640 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014099 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000003891 | possible_ortholog | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004537 | possible_ortholog | 11 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003562 | possible_ortholog | 16 retrogenes | |
| Oreochromis niloticus | ENSONIG00000006539 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000021035 | possible_ortholog | 14 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000006564 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000025928 | possible_ortholog | 5 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000012258 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_772 | 88.18 | 58.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1073 | 70.34 | 61.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1202 | 69.07 | 61.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_1331 | 73.20 | 59.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_1617 | 83.54 | 85.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_1706 | 85.79 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_3235 | 79.58 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_hsap_3794 | 83.68 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_hsap_3895 | 86.11 | 89.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_hsap_4001 | 82.46 | 60.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_hsap_4111 | 64.77 | 92.02 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000063177 retrocopies