Parental gene: | MTHFD2, ENSG00000065911 |
| Aliases: | None |
| Description: | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:HGNC Symbol;Acc:7434] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 2:74425688..74444692(+) |
>ENSG00000065911
ATGGCTGCGACTTCTCTAATGTCTGCTTTGGCTGCCCGGCTGCTGCAGCCCGCGCACAGCTGCTCCCTTCGCCTTCGCCC
TTTCCACCTCGCGGCAGTTCGAAATGAAGCTGTTGTCATTTCTGGAAGGAAACTGGCCCAGCAGATCAAGCAGGAAGTGC
GGCAGGAGGTAGAAGAGTGGGTGGCCTCAGGCAACAAACGGCCACACCTGAGTGTGATCCTGGTTGGCGAGAATCCTGCA
AGTCACTCCTATGTCCTCAACAAAACCAGGGCAGCTGCAGTTGTGGGAATCAACAGTGAGACAATTATGAAACCAGCTTC
AATTTCAGAGGAAGAATTGTTGAATTTAATCAATAAACTGAATAATGATGATAATGTAGATGGCCTCCTTGTTCAGTTGC
CTCTTCCAGAGCATATTGATGAGAGAAGGATCTGCAATGCTGTTTCTCCAGACAAGGATGTTGATGGCTTTCATGTAATT
AATGTAGGACGAATGTGTTTGGATCAGTATTCCATGTTACCGGCTACTCCATGGGGTGTGTGGGAAATAATCAAGCGAAC
TGGCATTCCAACCCTAGGGAAGAATGTGGTTGTGGCTGGAAGGTCAAAAAACGTTGGAATGCCCATTGCAATGTTACTGC
ACACAGATGGGGCGCATGAACGTCCCGGAGGTGATGCCACTGTTACAATATCTCATCGATATACTCCCAAAGAGCAGTTG
AAGAAACATACAATTCTTGCAGATATTGTAATATCTGCTGCAGGTATTCCAAATCTGATCACAGCAGATATGATCAAGGA
AGGAGCAGCAGTCATTGATGTGGGAATAAATAGAGTTCACGATCCTGTAACTGCCAAACCCAAGTTGGTTGGAGATGTGG
ATTTTGAAGGAGTCAGACAAAAAGCTGGGTATATCACTCCAGTTCCTGGAGGTGTTGGCCCCATGACAGTGGCAATGCTA
ATGAAGAATACCATTATTGCTGCAAAAAAGGTGCTGAGGCTTGAAGAGCGAGAAGTGCTGAAGTCTAAAGAGCTTGGGGT
AGCCACTAATTAA
ATGGCTGCGACTTCTCTAATGTCTGCTTTGGCTGCCCGGCTGCTGCAGCCCGCGCACAGCTGCTCCCTTCGCCTTCGCCC
TTTCCACCTCGCGGCAGTTCGAAATGAAGCTGTTGTCATTTCTGGAAGGAAACTGGCCCAGCAGATCAAGCAGGAAGTGC
GGCAGGAGGTAGAAGAGTGGGTGGCCTCAGGCAACAAACGGCCACACCTGAGTGTGATCCTGGTTGGCGAGAATCCTGCA
AGTCACTCCTATGTCCTCAACAAAACCAGGGCAGCTGCAGTTGTGGGAATCAACAGTGAGACAATTATGAAACCAGCTTC
AATTTCAGAGGAAGAATTGTTGAATTTAATCAATAAACTGAATAATGATGATAATGTAGATGGCCTCCTTGTTCAGTTGC
CTCTTCCAGAGCATATTGATGAGAGAAGGATCTGCAATGCTGTTTCTCCAGACAAGGATGTTGATGGCTTTCATGTAATT
AATGTAGGACGAATGTGTTTGGATCAGTATTCCATGTTACCGGCTACTCCATGGGGTGTGTGGGAAATAATCAAGCGAAC
TGGCATTCCAACCCTAGGGAAGAATGTGGTTGTGGCTGGAAGGTCAAAAAACGTTGGAATGCCCATTGCAATGTTACTGC
ACACAGATGGGGCGCATGAACGTCCCGGAGGTGATGCCACTGTTACAATATCTCATCGATATACTCCCAAAGAGCAGTTG
AAGAAACATACAATTCTTGCAGATATTGTAATATCTGCTGCAGGTATTCCAAATCTGATCACAGCAGATATGATCAAGGA
AGGAGCAGCAGTCATTGATGTGGGAATAAATAGAGTTCACGATCCTGTAACTGCCAAACCCAAGTTGGTTGGAGATGTGG
ATTTTGAAGGAGTCAGACAAAAAGCTGGGTATATCACTCCAGTTCCTGGAGGTGTTGGCCCCATGACAGTGGCAATGCTA
ATGAAGAATACCATTATTGCTGCAAAAAAGGTGCTGAGGCTTGAAGAGCGAGAAGTGCTGAAGTCTAAAGAGCTTGGGGT
AGCCACTAATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 2 .41 RPM |
| bodymap2_lung | 69 .83 RPM |
| bodymap2_breast | 25 .91 RPM |
| bodymap2_adipose | 50 .93 RPM |
| bodymap2_adrenal | 66 .94 RPM |
| bodymap2_skeletal_muscle | 126 .33 RPM |
| bodymap2_thyroid | 49 .13 RPM |
| bodymap2_prostate | 56 .41 RPM |
| bodymap2_colon | 92 .15 RPM |
| bodymap2_testis | 53 .07 RPM |
| bodymap2_brain | 25 .17 RPM |
| bodymap2_heart | 32 .51 RPM |
| bodymap2_white_blood_cells | 46 .62 RPM |
| bodymap2_lymph_node | 112 .66 RPM |
| bodymap2_ovary | 73 .56 RPM |
| bodymap2_kidney | 50 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017345 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000008716 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017810 | possible_ortholog | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000013987 | ortholog_one2one | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000007829 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000326 | ortholog_one2one | 5 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009089 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000012081 | ortholog_one2one | 4 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000013948 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2732 | 90.49 | 92.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_2817 | 77.09 | 64.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_3002 | 67.96 | 71.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_3309 | 81.36 | 83.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_3874 | 83.82 | 76.57 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000065911 retrocopies