Parental gene: | HAUS1, ENSG00000152240 |
| Aliases: | HAUS1, CCDC5, HEI-C, HEIC, HsT1461 |
| Description: | HAUS augmin-like complex, subunit 1 [Source:HGNC Symbol;Acc:25174] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 18:43684297..43708299(+) |
>ENSG00000152240
ATGGAGCCGCAGGAGGAGAGAGAAACGCAGGTTGCTGCGTGGTTAAAAAAAATATTTGGAGATCATCCTATTCCACAGTA
TGAGGTGAACCCACGGACCACAGAGATTTTACATCACCTTTCAGAACGCAACAGGGTCCGGGACAGGGATGTCTACCTGG
TAATAGAGGACTTGAAGCAGAAAGCAAGTGAATACGAGTCAGAAGCCAAGTATCTTCAAGACCTTCTCATGGAGAGTGTG
AATTTTTCCCCCGCCAATCTCTCTAGCACTGGTTCCAGGTATCTGAATGCTTTGGTTGACAGTGCGGTGGCCCTTGAAAC
AAAGGATACCTCGCTAGCTAGTTTTATCCCTGCAGTGAATGATTTGACCTCTGATCTCTTTCGTACCAAATCCAAAAGTG
AAGAAATCAAGATTGAACTGGAAAAACTTGAAAAAAATTTAACTGCAACTTTAGTATTAGAAAAATGTCTACAAGAGGAT
GTCAAGAAAGCAGAGTTGCATCTGTCTACAGAAAGGGCCAAAGTTGATAATCGTCGTCAGAACATGGACTTTCTAAAAGC
AAAGTCAGAGGAATTCAGATTTGGAATCAAGGCTGCAGAGGAGCAACTTTCAGCCAGAGGCATGGATGCTTCTCTGTCTC
ATCAGTCCTTAGTAGCACTATCAGAGAAACTGGCAAGATTAAAGCAACAGACTATACCTTTGAAGAAAAAATTGGAGTCC
TATTTAGACTTAATGCCGAATCCGTCTCTTGCTCAAGTGAAAATTGAAGAAGCAAAGCGAGAACTAGATAGCATTGAAGC
TGAACTTACAAGAAGAGTAGACATGATGGAACTGTGA
ATGGAGCCGCAGGAGGAGAGAGAAACGCAGGTTGCTGCGTGGTTAAAAAAAATATTTGGAGATCATCCTATTCCACAGTA
TGAGGTGAACCCACGGACCACAGAGATTTTACATCACCTTTCAGAACGCAACAGGGTCCGGGACAGGGATGTCTACCTGG
TAATAGAGGACTTGAAGCAGAAAGCAAGTGAATACGAGTCAGAAGCCAAGTATCTTCAAGACCTTCTCATGGAGAGTGTG
AATTTTTCCCCCGCCAATCTCTCTAGCACTGGTTCCAGGTATCTGAATGCTTTGGTTGACAGTGCGGTGGCCCTTGAAAC
AAAGGATACCTCGCTAGCTAGTTTTATCCCTGCAGTGAATGATTTGACCTCTGATCTCTTTCGTACCAAATCCAAAAGTG
AAGAAATCAAGATTGAACTGGAAAAACTTGAAAAAAATTTAACTGCAACTTTAGTATTAGAAAAATGTCTACAAGAGGAT
GTCAAGAAAGCAGAGTTGCATCTGTCTACAGAAAGGGCCAAAGTTGATAATCGTCGTCAGAACATGGACTTTCTAAAAGC
AAAGTCAGAGGAATTCAGATTTGGAATCAAGGCTGCAGAGGAGCAACTTTCAGCCAGAGGCATGGATGCTTCTCTGTCTC
ATCAGTCCTTAGTAGCACTATCAGAGAAACTGGCAAGATTAAAGCAACAGACTATACCTTTGAAGAAAAAATTGGAGTCC
TATTTAGACTTAATGCCGAATCCGTCTCTTGCTCAAGTGAAAATTGAAGAAGCAAAGCGAGAACTAGATAGCATTGAAGC
TGAACTTACAAGAAGAGTAGACATGATGGAACTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 4 .96 RPM |
| bodymap2_lung | 7 .74 RPM |
| bodymap2_breast | 9 .01 RPM |
| bodymap2_adipose | 12 .92 RPM |
| bodymap2_adrenal | 16 .40 RPM |
| bodymap2_skeletal_muscle | 1 .44 RPM |
| bodymap2_thyroid | 12 .84 RPM |
| bodymap2_prostate | 19 .78 RPM |
| bodymap2_colon | 11 .68 RPM |
| bodymap2_testis | 21 .74 RPM |
| bodymap2_brain | 5 .44 RPM |
| bodymap2_heart | 4 .45 RPM |
| bodymap2_white_blood_cells | 14 .81 RPM |
| bodymap2_lymph_node | 12 .59 RPM |
| bodymap2_ovary | 15 .98 RPM |
| bodymap2_kidney | 10 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000001139 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010098 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000010897 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003124 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000003208 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011216 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000009131 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000009992 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000010911 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3247 | 91.39 | 74.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_4075 | 76.58 | 78.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_4655 | 90.57 | 93.88 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000152240 retrocopies