Parental gene: | HAUS1, ENSPTRG00000009992 |
| Aliases: | HAUS1, CCDC5 |
| Description: | HAUS augmin-like complex, subunit 1 [Source:HGNC Symbol;Acc:25174] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 18:42044952..42068171(+) |
>ENSPTRG00000009992
ATGGAGCCGCAGGAGGAGAGAGAAACGCAGGTTGCTGCGTGGTTAAAAAAAATATTTGGAGATCATCCTATTCCACAGTA
TGAGGTGAACCCACGGACCACAGAGATTTTACATCACCTTTCAGAACGCAACAGGGTCCGGGACAGGGATGTCTACCTGG
TAATAGAGGACTTGAAGCAGAAAGCAAGTGAATACGAGTCAGAAGCCAAGTATCTTCAAGACCTTCTCATGGAGAGTGTG
AATTTTTCCCCCGCCAATCTCTCTAGCACTGGTTCCAGGTATCTGAATGCTTTGGTTGACAGTGCGGTGGCCCTTGAAAC
AAAGGATACCTCGCTAGCTAGTTTTATCCCTGCAGTGAATGATTTGACCTCTGATCTCTTTCGTACCAAATCCAAAAGTG
AAGAAATCAAGATTGAACTGGAAAAACTTGAAAAAAATTTAACTGCAACTTTAGTATTAGAAAAATGTCTACAAGAGGAT
GTCAAGAAAGCAGAGTTGCATCTGTCTACAGAAAGGGCCAAAGTTGATAATCGTCGTCAGAACATGGACTTTCTAAAAGC
AAAGTCAGAGGAATTCAGATTTGGAATCAAGGCTGCAGAGGAGCAACTTTCAGCCAGAGGCATGGATGCTTCTCTGTCTC
ATCAGTCCTTAGTAGCACTATCAGAGAAACTGGCAAGATTAAAGCAACAGACTATACCTTTGAAGAAAAAATTGGAGTCC
TATTTAGACTTAATGCCGAATCCGTCTCTTGCTCAAGTGAAAATTGAAGAAGCAAAGCGAGAACTAGATAGCATTGAAGC
TGAACTTACAAGAAGAGTAGACATGATGGAACTGTGA
ATGGAGCCGCAGGAGGAGAGAGAAACGCAGGTTGCTGCGTGGTTAAAAAAAATATTTGGAGATCATCCTATTCCACAGTA
TGAGGTGAACCCACGGACCACAGAGATTTTACATCACCTTTCAGAACGCAACAGGGTCCGGGACAGGGATGTCTACCTGG
TAATAGAGGACTTGAAGCAGAAAGCAAGTGAATACGAGTCAGAAGCCAAGTATCTTCAAGACCTTCTCATGGAGAGTGTG
AATTTTTCCCCCGCCAATCTCTCTAGCACTGGTTCCAGGTATCTGAATGCTTTGGTTGACAGTGCGGTGGCCCTTGAAAC
AAAGGATACCTCGCTAGCTAGTTTTATCCCTGCAGTGAATGATTTGACCTCTGATCTCTTTCGTACCAAATCCAAAAGTG
AAGAAATCAAGATTGAACTGGAAAAACTTGAAAAAAATTTAACTGCAACTTTAGTATTAGAAAAATGTCTACAAGAGGAT
GTCAAGAAAGCAGAGTTGCATCTGTCTACAGAAAGGGCCAAAGTTGATAATCGTCGTCAGAACATGGACTTTCTAAAAGC
AAAGTCAGAGGAATTCAGATTTGGAATCAAGGCTGCAGAGGAGCAACTTTCAGCCAGAGGCATGGATGCTTCTCTGTCTC
ATCAGTCCTTAGTAGCACTATCAGAGAAACTGGCAAGATTAAAGCAACAGACTATACCTTTGAAGAAAAAATTGGAGTCC
TATTTAGACTTAATGCCGAATCCGTCTCTTGCTCAAGTGAAAATTGAAGAAGCAAAGCGAGAACTAGATAGCATTGAAGC
TGAACTTACAAGAAGAGTAGACATGATGGAACTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 1 .88 RPM |
| SRP007412_cerebellum | 3 .94 RPM |
| SRP007412_heart | 1 .92 RPM |
| SRP007412_kidney | 5 .31 RPM |
| SRP007412_liver | 3 .90 RPM |
| SRP007412_testis | 9 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000001139 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000152240 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010098 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000010897 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003124 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000003208 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011216 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000009131 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000010911 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2195 | 91.39 | 74.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2762 | 77.03 | 78.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_3092 | 86.74 | 93.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000009992 retrocopies