Parental gene:

HAUS1, ENSPTRG00000009992

Aliases:HAUS1, CCDC5
Description:HAUS augmin-like complex, subunit 1 [Source:HGNC Symbol;Acc:25174]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:18:42044952..42068171(+)


>ENSPTRG00000009992
ATGGAGCCGCAGGAGGAGAGAGAAACGCAGGTTGCTGCGTGGTTAAAAAAAATATTTGGAGATCATCCTATTCCACAGTA
TGAGGTGAACCCACGGACCACAGAGATTTTACATCACCTTTCAGAACGCAACAGGGTCCGGGACAGGGATGTCTACCTGG
TAATAGAGGACTTGAAGCAGAAAGCAAGTGAATACGAGTCAGAAGCCAAGTATCTTCAAGACCTTCTCATGGAGAGTGTG
AATTTTTCCCCCGCCAATCTCTCTAGCACTGGTTCCAGGTATCTGAATGCTTTGGTTGACAGTGCGGTGGCCCTTGAAAC
AAAGGATACCTCGCTAGCTAGTTTTATCCCTGCAGTGAATGATTTGACCTCTGATCTCTTTCGTACCAAATCCAAAAGTG
AAGAAATCAAGATTGAACTGGAAAAACTTGAAAAAAATTTAACTGCAACTTTAGTATTAGAAAAATGTCTACAAGAGGAT
GTCAAGAAAGCAGAGTTGCATCTGTCTACAGAAAGGGCCAAAGTTGATAATCGTCGTCAGAACATGGACTTTCTAAAAGC
AAAGTCAGAGGAATTCAGATTTGGAATCAAGGCTGCAGAGGAGCAACTTTCAGCCAGAGGCATGGATGCTTCTCTGTCTC
ATCAGTCCTTAGTAGCACTATCAGAGAAACTGGCAAGATTAAAGCAACAGACTATACCTTTGAAGAAAAAATTGGAGTCC
TATTTAGACTTAATGCCGAATCCGTCTCTTGCTCAAGTGAAAATTGAAGAAGCAAAGCGAGAACTAGATAGCATTGAAGC
TGAACTTACAAGAAGAGTAGACATGATGGAACTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .88 RPM
SRP007412_cerebellum 3 .94 RPM
SRP007412_heart 1 .92 RPM
SRP007412_kidney 5 .31 RPM
SRP007412_liver 3 .90 RPM
SRP007412_testis 9 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001139 ortholog_one2one 3 retrogenes
retro_chof_237, retro_chof_2496, retro_chof_255,
Homo sapiens ENSG00000152240 ortholog_one2one 3 retrogenes
retro_hsap_3247, retro_hsap_4075, retro_hsap_4655,
Gorilla gorilla ENSGGOG00000010098 ortholog_one2one 2 retrogenes
retro_ggor_2210, retro_ggor_2888,
Loxodonta africana ENSLAFG00000010897 ortholog_one2many 1 retrogene
retro_lafr_1063,
Macaca mulatta ENSMMUG00000003124 ortholog_one2one 2 retrogenes
retro_mmul_2043, retro_mmul_2476,
Monodelphis domestica ENSMODG00000003208 ortholog_one2one 1 retrogene
retro_mdom_743,
Nomascus leucogenys ENSNLEG00000011216 ortholog_one2one 3 retrogenes
retro_nleu_1091, retro_nleu_1698, retro_nleu_2043,
Pongo abelii ENSPPYG00000009131 ortholog_one2one 3 retrogenes
retro_pabe_2693, retro_pabe_3344, retro_pabe_3615,
Tupaia belangeri ENSTBEG00000010911 ortholog_one2one 4 retrogenes
retro_tbel_1209, retro_tbel_1348, retro_tbel_3868, retro_tbel_4672,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2195 91.39 74.82
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2. retro_ptro_2762 77.03 78.78
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3. retro_ptro_3092 86.74 93.17
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Download FASTA sequences of all ENSPTRG00000009992 retrocopies