Parental gene: | CFL1, ENSG00000172757 |
| Aliases: | CFL1, CFL, HEL-S-15 |
| Description: | cofilin 1 (non-muscle) [Source:HGNC Symbol;Acc:1874] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 11:65590492..65629497(-) |
>ENSG00000172757
ATGGCCTCCGGTGTGGCTGTCTCTGATGGTGTCATCAAGGTGTTCAACGACATGAAGGTGCGTAAGTCTTCAACGCCAGA
GGAGGTGAAGAAGCGCAAGAAGGCGGTGCTCTTCTGCCTGAGTGAGGACAAGAAGAACATCATCCTGGAGGAGGGCAAGG
AGATCCTGGTGGGCGATGTGGGCCAGACTGTCGACGACCCCTACGCCACCTTTGTCAAGATGCTGCCAGATAAGGACTGC
CGCTATGCCCTCTATGATGCAACCTATGAGACCAAGGAGAGCAAGAAGGAGGATCTGGTGTTTATCTTCTGGGCCCCCGA
GTCTGCGCCCCTTAAGAGCAAAATGATTTATGCCAGCTCCAAGGACGCCATCAAGAAGAAGCTGACAGGGATCAAGCATG
AATTGCAAGCAAACTGCTACGAGGAGGTCAAGGACCGCTGCACCCTGGCAGAGAAGCTGGGGGGCAGTGCCGTCATCTCC
CTGGAGGGCAAGCCTTTGTGA
ATGGCCTCCGGTGTGGCTGTCTCTGATGGTGTCATCAAGGTGTTCAACGACATGAAGGTGCGTAAGTCTTCAACGCCAGA
GGAGGTGAAGAAGCGCAAGAAGGCGGTGCTCTTCTGCCTGAGTGAGGACAAGAAGAACATCATCCTGGAGGAGGGCAAGG
AGATCCTGGTGGGCGATGTGGGCCAGACTGTCGACGACCCCTACGCCACCTTTGTCAAGATGCTGCCAGATAAGGACTGC
CGCTATGCCCTCTATGATGCAACCTATGAGACCAAGGAGAGCAAGAAGGAGGATCTGGTGTTTATCTTCTGGGCCCCCGA
GTCTGCGCCCCTTAAGAGCAAAATGATTTATGCCAGCTCCAAGGACGCCATCAAGAAGAAGCTGACAGGGATCAAGCATG
AATTGCAAGCAAACTGCTACGAGGAGGTCAAGGACCGCTGCACCCTGGCAGAGAAGCTGGGGGGCAGTGCCGTCATCTCC
CTGGAGGGCAAGCCTTTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 182 .09 RPM |
| bodymap2_lung | 512 .10 RPM |
| bodymap2_breast | 215 .18 RPM |
| bodymap2_adipose | 357 .29 RPM |
| bodymap2_adrenal | 443 .33 RPM |
| bodymap2_skeletal_muscle | 64 .60 RPM |
| bodymap2_thyroid | 173 .89 RPM |
| bodymap2_prostate | 284 .97 RPM |
| bodymap2_colon | 251 .77 RPM |
| bodymap2_testis | 209 .61 RPM |
| bodymap2_brain | 248 .63 RPM |
| bodymap2_heart | 129 .43 RPM |
| bodymap2_white_blood_cells | 780 .01 RPM |
| bodymap2_lymph_node | 360 .10 RPM |
| bodymap2_ovary | 214 .98 RPM |
| bodymap2_kidney | 272 .71 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017334 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000024955 | ortholog_one2one | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001916 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000019900 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000013272 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000125868 | within_species_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000023183 | ortholog_one2one | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000024685 | ortholog_one2one | 6 retrogenes | |
| Macaca mulatta | ENSMMUG00000019016 | possible_ortholog | 5 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011502 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005852 | ortholog_one2one | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000025604 | possible_ortholog | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016503 | possible_ortholog | 8 retrogenes | |
| Pongo abelii | ENSPPYG00000003047 | ortholog_one2one | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000003895 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000020660 | possible_ortholog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000027968 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000016931 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_287 | 66.03 | 73.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_336 | 81.10 | 98.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_384 | 86.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_400 | 82.72 | 97.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_2617 | 69.88 | 98.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_3333 | 77.51 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000172757 retrocopies