Parental gene:

UBL5, ENSG00000198258

Aliases:UBL5, HUB1
Description:ubiquitin-like 5 [Source:HGNC Symbol;Acc:13736]
Organism:Human (Homo sapiens)
Coordinates:19:9938567..9940791(+)


>ENSG00000198258
ATGATCGAGGTTGTTTGCAACGACCGTCTGGGGAAGAAGGTCCGCGTTAAATGCAACACGGATGATACCATCGGGGACCT
TAAGAAGCTGATTGCAGCCCAAACTGGTACCCGTTGGAACAAGATTGTCCTGAAGAAGTGGTACACGATTTTTAAGGACC
ACGTGTCTCTGGGGGACTATGAAATCCACGATGGGATGAACCTGGAGCTTTATTATCAATAG

Library Parental gene expression (RPM)
bodymap2_adipose 54 .49 RPM
bodymap2_adrenal 75 .20 RPM
bodymap2_brain 74 .42 RPM
bodymap2_breast 74 .94 RPM
bodymap2_colon 85 .12 RPM
bodymap2_heart 72 .66 RPM
bodymap2_kidney 83 .38 RPM
bodymap2_liver 54 .23 RPM
bodymap2_lung 78 .53 RPM
bodymap2_lymph_node 69 .46 RPM
bodymap2_ovary 80 .69 RPM
bodymap2_prostate 86 .20 RPM
bodymap2_skeletal_muscle 45 .00 RPM
bodymap2_testis 125 .79 RPM
bodymap2_thyroid 109 .15 RPM
bodymap2_white_blood_cells 89 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006097 ortholog_one2one 1 retrogene
retro_cjac_1394,
Dasypus novemcinctus ENSDNOG00000006384 ortholog_one2one 5 retrogenes
retro_dnov_1858, retro_dnov_196, retro_dnov_2470, retro_dnov_2590, retro_dnov_860,
Gorilla gorilla ENSGGOG00000005999 ortholog_one2many 1 retrogene
retro_ggor_173,
Loxodonta africana ENSLAFG00000012892 ortholog_one2one 2 retrogenes
retro_lafr_1245, retro_lafr_699,
Macropus eugenii ENSMEUG00000015506 ortholog_one2one 2 retrogenes
retro_meug_300, retro_meug_304,
Myotis lucifugus ENSMLUG00000027369 ortholog_one2one 2 retrogenes
retro_mluc_1516, retro_mluc_1766,
Macaca mulatta ENSMMUG00000007877 ortholog_one2one 2 retrogenes
retro_mmul_1437, retro_mmul_1996,
Mus musculus ENSMUSG00000084786 possible_ortholog 1 retrogene
retro_mmus_98,
Pongo abelii ENSPPYG00000009536 ortholog_one2one 3 retrogenes
retro_pabe_1489, retro_pabe_2226, retro_pabe_2814,
Pan troglodytes ENSPTRG00000010451 ortholog_one2one 3 retrogenes
retro_ptro_1170, retro_ptro_1895, retro_ptro_2280,
Pteropus vampyrus ENSPVAG00000008628 ortholog_one2one 1 retrogene
retro_pvam_1461,
Sarcophilus harrisii ENSSHAG00000010974 ortholog_one2one 1 retrogene
retro_shar_753,
Sus scrofa ENSSSCG00000023331 ortholog_one2one 2 retrogenes
retro_sscr_544, retro_sscr_608,
Tursiops truncatus ENSTTRG00000008535 ortholog_one2one 1 retrogene
retro_ttru_166,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1821 95.89 100.00
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2. retro_hsap_2798 67.31 71.23
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3. retro_hsap_3154 70.97 83.56
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Download FASTA sequences of all ENSG00000198258 retrocopies