Parental gene:

UBL5, ENSSSCG00000023331

Aliases:None
Description:Sus scrofa ubiquitin-like 5 (UBL5), mRNA. [Source:RefSeq mRNA;Acc:NM_001204116]
Organism:Pig (Sus scrofa)
Coordinates:2:68933922..68935737(+)


>ENSSSCG00000023331
ATGATCGAGGTTGTTTGCAACGACCGTCTGGGGAAGAAGGTCCGCGTTAAATGCAATACGGATGACACCATCGGGGACCT
TAAGAAGCTGATCGCAGCCCAAACTGGCACCCGTTGGAACAAGATCGTATTGAAGAAGTGGTACACGATTTTTAAGGACC
ACGTGTCTCTGGGGGACTATGAAATCCATGATGGGATGAACCTGGAGCTTTATTACCAATAA

Library Parental gene expression (RPM)
SRP014902_placenta 23 .76 RPM
SRP014902_testis 36 .35 RPM
SRP018288_heart 46 .70 RPM
SRP018288_kidney 70 .53 RPM
SRP018288_liver 42 .22 RPM
SRP018288_lung 63 .44 RPM
SRP018856_adipose 67 .96 RPM
SRP035408_brain 38 .02 RPM
SRP035408_liver 27 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006097 ortholog_one2one 1 retrogene
retro_cjac_1394,
Dasypus novemcinctus ENSDNOG00000006384 ortholog_one2one 5 retrogenes
retro_dnov_1858, retro_dnov_196, retro_dnov_2470, retro_dnov_2590, retro_dnov_860,
Homo sapiens ENSG00000198258 ortholog_one2one 3 retrogenes
retro_hsap_1821, retro_hsap_2798, retro_hsap_3154,
Gorilla gorilla ENSGGOG00000005999 ortholog_one2many 1 retrogene
retro_ggor_173,
Loxodonta africana ENSLAFG00000012892 ortholog_one2one 2 retrogenes
retro_lafr_1245, retro_lafr_699,
Macropus eugenii ENSMEUG00000015506 ortholog_one2one 2 retrogenes
retro_meug_300, retro_meug_304,
Myotis lucifugus ENSMLUG00000027369 ortholog_one2one 2 retrogenes
retro_mluc_1516, retro_mluc_1766,
Macaca mulatta ENSMMUG00000007877 ortholog_one2one 2 retrogenes
retro_mmul_1437, retro_mmul_1996,
Mus musculus ENSMUSG00000084786 possible_ortholog 1 retrogene
retro_mmus_98,
Pongo abelii ENSPPYG00000009536 ortholog_one2one 3 retrogenes
retro_pabe_1489, retro_pabe_2226, retro_pabe_2814,
Pan troglodytes ENSPTRG00000010451 ortholog_one2one 3 retrogenes
retro_ptro_1170, retro_ptro_1895, retro_ptro_2280,
Pteropus vampyrus ENSPVAG00000008628 ortholog_one2one 1 retrogene
retro_pvam_1461,
Sarcophilus harrisii ENSSHAG00000010974 ortholog_one2one 1 retrogene
retro_shar_753,
Tursiops truncatus ENSTTRG00000008535 ortholog_one2one 1 retrogene
retro_ttru_166,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_544 97.26 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_sscr_608 74.32 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000023331 retrocopies