Parental gene:

UBL5, ENSPPYG00000009536

Aliases:None
Description:ubiquitin-like protein 5 [Source:RefSeq peptide;Acc:NP_001125281]
Organism:Orangutan (Pongo abelii)
Coordinates:19:10039198..10041393(+)


>ENSPPYG00000009536
ATGATCGAGGTTGTTTGCAACGACCGTCTGGGGAAGAAGGTCCGCGTTAAATGCAACACGGATGATACCATCGGGGACCT
TAAGAAGCTGATTGCAGCCCAAACTGGCACCCGTTGGAACAAGATTGTCCTGAAGAAGTGGTACACGATTTTTAAGGACC
ACGTGTCTCTGGGGGACTATGAAATCCACGATGGGATGAACCTGGAGCTTTATTATCAATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 44 .07 RPM
SRP007412_cerebellum 43 .65 RPM
SRP007412_heart 50 .30 RPM
SRP007412_kidney 84 .23 RPM
SRP007412_liver 68 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006097 ortholog_one2one 1 retrogene
retro_cjac_1394,
Dasypus novemcinctus ENSDNOG00000006384 ortholog_one2one 5 retrogenes
retro_dnov_1858, retro_dnov_196, retro_dnov_2470, retro_dnov_2590, retro_dnov_860,
Homo sapiens ENSG00000198258 ortholog_one2one 3 retrogenes
retro_hsap_1821, retro_hsap_2798, retro_hsap_3154,
Gorilla gorilla ENSGGOG00000005999 ortholog_one2many 1 retrogene
retro_ggor_173,
Loxodonta africana ENSLAFG00000012892 ortholog_one2one 2 retrogenes
retro_lafr_1245, retro_lafr_699,
Macropus eugenii ENSMEUG00000015506 ortholog_one2one 2 retrogenes
retro_meug_300, retro_meug_304,
Myotis lucifugus ENSMLUG00000027369 ortholog_one2one 2 retrogenes
retro_mluc_1516, retro_mluc_1766,
Macaca mulatta ENSMMUG00000007877 ortholog_one2one 2 retrogenes
retro_mmul_1437, retro_mmul_1996,
Mus musculus ENSMUSG00000084786 possible_ortholog 1 retrogene
retro_mmus_98,
Pan troglodytes ENSPTRG00000010451 ortholog_one2one 3 retrogenes
retro_ptro_1170, retro_ptro_1895, retro_ptro_2280,
Pteropus vampyrus ENSPVAG00000008628 ortholog_one2one 1 retrogene
retro_pvam_1461,
Sarcophilus harrisii ENSSHAG00000010974 ortholog_one2one 1 retrogene
retro_shar_753,
Sus scrofa ENSSSCG00000023331 ortholog_one2one 2 retrogenes
retro_sscr_544, retro_sscr_608,
Tursiops truncatus ENSTTRG00000008535 ortholog_one2one 1 retrogene
retro_ttru_166,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1489 66.67 94.52
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2. retro_pabe_2226 67.31 71.23
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3. retro_pabe_2814 71.43 83.56
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Download FASTA sequences of all ENSPPYG00000009536 retrocopies