Parental gene:

CHP1, ENSG00000187446

Aliases:CHP1, CHP, SLC9A1BP, Sid470p, p22, p24
Description:calcineurin-like EF-hand protein 1 [Source:HGNC Symbol;Acc:17433]
Organism:Human (Homo sapiens)
Coordinates:15:41523036..41574043(+)


>ENSG00000187446
ATGGGTTCTCGGGCCTCCACGTTACTGCGGGACGAAGAGCTCGAGGAGATCAAGAAGGAGACCGGCTTTTCCCACAGTCA
AATCACTCGCCTCTACAGCCGGTTCACCAGCCTGGACAAAGGAGAGAATGGGACTCTCAGCCGGGAAGATTTCCAGAGGA
TTCCAGAACTTGCCATCAACCCACTGGGGGACCGGATCATCAATGCCTTCTTTCCAGAGGGAGAGGACCAGGTAAACTTC
CGTGGATTCATGCGAACTTTGGCTCATTTCCGCCCCATTGAGGATAATGAAAAGAGCAAAGATGTGAATGGACCCGAACC
ACTCAACAGCCGAAGCAACAAACTGCACTTTGCTTTTCGACTATATGATTTGGATAAAGATGAAAAGATCTCCCGTGATG
AGCTGTTACAGGTGCTACGCATGATGGTCGGAGTAAATATCTCAGATGAGCAGCTGGGCAGCATCGCAGACAGGACCATT
CAGGAGGCTGATCAGGATGGGGACAGTGCCATATCTTTCACAGAATTTGTTAAGGTTTTGGAGAAGGTGGATGTAGAACA
GAAAATGAGCATCCGATTTCTTCACTAA

Library Parental gene expression (RPM)
bodymap2_liver 308 .93 RPM
bodymap2_lung 189 .28 RPM
bodymap2_breast 241 .40 RPM
bodymap2_adipose 245 .75 RPM
bodymap2_adrenal 63 .78 RPM
bodymap2_skeletal_muscle 237 .62 RPM
bodymap2_thyroid 124 .31 RPM
bodymap2_prostate 116 .17 RPM
bodymap2_colon 136 .98 RPM
bodymap2_testis 89 .36 RPM
bodymap2_brain 127 .14 RPM
bodymap2_heart 100 .74 RPM
bodymap2_white_blood_cells 196 .15 RPM
bodymap2_lymph_node 90 .84 RPM
bodymap2_ovary 94 .30 RPM
bodymap2_kidney 197 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000009525 ortholog_one2one 1 retrogene
retro_cfam_2136,
Cavia porcellus ENSCPOG00000010577 ortholog_one2one 2 retrogenes
retro_cpor_1224, retro_cpor_726,
Homo sapiens ENSG00000221823 within_species_paralog 1 retrogene
retro_hsap_3,
Gorilla gorilla ENSGGOG00000007312 ortholog_one2one 2 retrogenes
retro_ggor_1293, retro_ggor_2392,
Macaca mulatta ENSMMUG00000017092 ortholog_one2one 2 retrogenes
retro_mmul_1809, retro_mmul_2088,
Mus musculus ENSMUSG00000014077 ortholog_one2one 4 retrogenes
retro_mmus_1458, retro_mmus_2094, retro_mmus_3133, retro_mmus_3469,
Nomascus leucogenys ENSNLEG00000003465 ortholog_one2one 4 retrogenes
retro_nleu_1678, retro_nleu_2269, retro_nleu_2608, retro_nleu_2609,
Procavia capensis ENSPCAG00000005419 ortholog_one2one 1 retrogene
retro_pcap_240,
Pongo abelii ENSPPYG00000006370 ortholog_one2one 2 retrogenes
retro_pabe_2749, retro_pabe_2925,
Pan troglodytes ENSPTRG00000006942 ortholog_one2one 2 retrogenes
retro_ptro_2144, retro_ptro_2407,
Rattus norvegicus ENSRNOG00000004742 ortholog_one2one 2 retrogenes
retro_rnor_2034, retro_rnor_2223,
Ictidomys tridecemlineatus ENSSTOG00000014503 ortholog_one2one 1 retrogene
retro_itri_227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3334 84.77 100.00
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2. retro_hsap_3541 82.81 65.64
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Download FASTA sequences of all ENSG00000187446 retrocopies