Parental gene: | EIF2S2, ENSGGOG00000015546 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 20:31450124..31467596(-) |
>ENSGGOG00000015546
TTGTCTTTTAAACAGATGATTTTTGATCCTACTATGCCTTTTATGTTAGATGAGGAAGGGGATACCCAAACAGAGGAAAC
CCAGCCTTCAGAAACAAAAGAAGTGGAGCCAGAGCCAACTGAGGACAAAGATTTGGAAGCTGATGAAGAGGACACTAGGA
AAAAAGATGCTTCTGATGATCTAGATGACTTGAACTTCTTTAATCAAAAGAAAAAGAAGAAAAAAACTAAAAAGATATTT
GATATTGATGAAGCTGAAGAAGGTGTAAAGGATCTTAAGATTGAAAGTGATGTTCAAGAACCAACTGAACCAGAGGATGA
CCTTGACATTATGCTTGGCAATAAAAAGAAGAAAAAGAAGAATGTTAAGTTCCCAGATGAGGATGAAATACTAGAGAAAG
ATGAAGCTCTAGAAGATGAAGACAACAAAAAAGATGATGGTATCTCATTCAGTAATCAGACAGGCCCTGCTTGGGCAGGC
TCAGAAAGAGACTACACATACGAGGAGCTGCTGAATCGAGTGTTCAACATCATGAGGGAAAAGAATCCAGATATGGTTGC
TGGGGAGAAAAGGAAATTTGTCATGAAACCTCCACAAGTCGTCCGAGTAGGAACCAAGAAAACTTCTTTTGTCAACTTTA
CAGATATCTGTAAACTATTACATCGTCAGCCCAAACATCTCCTTGCATTTTTGTTGGCTGAATTGGGTACAAGTGGTTCT
ATAGATGGTAATAACCAACTTGTAATCAAAGGAAGATTCCAACAGAAACAGATAGAAAATGTCTTGAGAAGATATATCAA
GGAATATGTCACTTGTCACACATGCCGATCACCGGACACAATCCTGCAGAAGGACACGCGACTCTATTTCCTACAGTGCG
AAACTTGTCATTCTAGATGTTCTGTTGCCAGTATCAAAACCGGCTTCCAGGCTGTCACGGGCAAGCGAGCACAGCTCCGT
GCCAAAGCTAACTAA
TTGTCTTTTAAACAGATGATTTTTGATCCTACTATGCCTTTTATGTTAGATGAGGAAGGGGATACCCAAACAGAGGAAAC
CCAGCCTTCAGAAACAAAAGAAGTGGAGCCAGAGCCAACTGAGGACAAAGATTTGGAAGCTGATGAAGAGGACACTAGGA
AAAAAGATGCTTCTGATGATCTAGATGACTTGAACTTCTTTAATCAAAAGAAAAAGAAGAAAAAAACTAAAAAGATATTT
GATATTGATGAAGCTGAAGAAGGTGTAAAGGATCTTAAGATTGAAAGTGATGTTCAAGAACCAACTGAACCAGAGGATGA
CCTTGACATTATGCTTGGCAATAAAAAGAAGAAAAAGAAGAATGTTAAGTTCCCAGATGAGGATGAAATACTAGAGAAAG
ATGAAGCTCTAGAAGATGAAGACAACAAAAAAGATGATGGTATCTCATTCAGTAATCAGACAGGCCCTGCTTGGGCAGGC
TCAGAAAGAGACTACACATACGAGGAGCTGCTGAATCGAGTGTTCAACATCATGAGGGAAAAGAATCCAGATATGGTTGC
TGGGGAGAAAAGGAAATTTGTCATGAAACCTCCACAAGTCGTCCGAGTAGGAACCAAGAAAACTTCTTTTGTCAACTTTA
CAGATATCTGTAAACTATTACATCGTCAGCCCAAACATCTCCTTGCATTTTTGTTGGCTGAATTGGGTACAAGTGGTTCT
ATAGATGGTAATAACCAACTTGTAATCAAAGGAAGATTCCAACAGAAACAGATAGAAAATGTCTTGAGAAGATATATCAA
GGAATATGTCACTTGTCACACATGCCGATCACCGGACACAATCCTGCAGAAGGACACGCGACTCTATTTCCTACAGTGCG
AAACTTGTCATTCTAGATGTTCTGTTGCCAGTATCAAAACCGGCTTCCAGGCTGTCACGGGCAAGCGAGCACAGCTCCGT
GCCAAAGCTAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 21 .34 RPM |
| SRP007412_cerebellum | 20 .37 RPM |
| SRP007412_heart | 8 .69 RPM |
| SRP007412_kidney | 41 .34 RPM |
| SRP007412_liver | 25 .32 RPM |
| SRP007412_testis | 52 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000018334 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000015439 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000001922 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000125977 | ortholog_one2one | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000006944 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018095 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000002805 | ortholog_one2one | 5 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000010034 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000001417 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010933 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000013412 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000017447 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_280 | 67.63 | 53.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_604 | 89.43 | 75.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_1683 | 66.27 | 50.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_1726 | 93.59 | 96.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_2007 | 83.88 | 74.69 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000015546 retrocopies