Parental gene: | PSME2, ENSGGOG00000016025 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 14:5110993..5115994(-) |
>ENSGGOG00000016025
ATGGCCAAGCCGTGTGGGGTGCGCCTGAGCGGGGAAGCCCGCAAACAGGTGGAGGTCTTCAGGCAGAATCTTTTCCAGGA
GGCTGAGGAATTCCTCTACAGATTCTTGCCACAGAAAATCATATACCTGAATCAGCTCTTGCAAGAGGACTCCCTCAATG
TGGCTGACTTGACTTCCCTCCGGGCCCCACTGGACATCCCCATCCCAGACCCTCCACCCAAGGATGATGAGATGGAAACA
GATAAGCAGGAGAAGAAAGAAGGTAAGAGAGATAAGAGAAAGGGCCTGAATCCCCTCTTTCTCACAGTCCCTAAGTGTGG
ATTTCTCCCTGGGAATGAGAAAGTCCTGTCCCTGCTTGCCCTGGTTAAGCCAGAAGTCTGGACTCTCAAAGAGAAATGCA
TTCTGGTGATTACATGGATCCAACACCTGATCCCCAAGATTGAAGATGGAAATGATTTTGGGGTAGCAATCCAGGAGAAG
GTGCTGGAGAGGGTGAATGCCGTCAAGACCAAAGTGGAAGCTTTCCAGACAACCATTTCCAAGTACTTCTCAGAATGTGG
GGATGCAGTGGCCAAGGCCTCCAAGGAGACTCATGTAATGGATTACCGGGCCTTGGTGCATGAGCGAGATGAGGCAGCCT
ATGGGGAGCTCAGGGCCATGGTGCTGGACCTGAGGGCCTTCTATGCTGAGCTTTATCATATCATCAGCAGCAACCTGGAG
AAAATTGTCAACCCAAAGGGTGAAGAAAAGCCATCTATGTACTGA
ATGGCCAAGCCGTGTGGGGTGCGCCTGAGCGGGGAAGCCCGCAAACAGGTGGAGGTCTTCAGGCAGAATCTTTTCCAGGA
GGCTGAGGAATTCCTCTACAGATTCTTGCCACAGAAAATCATATACCTGAATCAGCTCTTGCAAGAGGACTCCCTCAATG
TGGCTGACTTGACTTCCCTCCGGGCCCCACTGGACATCCCCATCCCAGACCCTCCACCCAAGGATGATGAGATGGAAACA
GATAAGCAGGAGAAGAAAGAAGGTAAGAGAGATAAGAGAAAGGGCCTGAATCCCCTCTTTCTCACAGTCCCTAAGTGTGG
ATTTCTCCCTGGGAATGAGAAAGTCCTGTCCCTGCTTGCCCTGGTTAAGCCAGAAGTCTGGACTCTCAAAGAGAAATGCA
TTCTGGTGATTACATGGATCCAACACCTGATCCCCAAGATTGAAGATGGAAATGATTTTGGGGTAGCAATCCAGGAGAAG
GTGCTGGAGAGGGTGAATGCCGTCAAGACCAAAGTGGAAGCTTTCCAGACAACCATTTCCAAGTACTTCTCAGAATGTGG
GGATGCAGTGGCCAAGGCCTCCAAGGAGACTCATGTAATGGATTACCGGGCCTTGGTGCATGAGCGAGATGAGGCAGCCT
ATGGGGAGCTCAGGGCCATGGTGCTGGACCTGAGGGCCTTCTATGCTGAGCTTTATCATATCATCAGCAGCAACCTGGAG
AAAATTGTCAACCCAAAGGGTGAAGAAAAGCCATCTATGTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 17 .98 RPM |
| SRP007412_cerebellum | 31 .05 RPM |
| SRP007412_heart | 18 .07 RPM |
| SRP007412_kidney | 66 .20 RPM |
| SRP007412_liver | 67 .03 RPM |
| SRP007412_testis | 28 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000007167 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000100911 | ortholog_one2one | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000012473 | ortholog_one2one | 4 retrogenes | |
| Mus musculus | ENSMUSG00000079197 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015260 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016584 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005684 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000006196 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_935 | 88.58 | 90.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_2078 | 86.13 | 56.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2093 | 79.34 | 99.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2188 | 92.95 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000016025 retrocopies