Parental gene:

PPIA, ENSLAFG00000011345

Aliases:None
Description:Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:G3TX01]
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_63:12985637..12989802(+)


>ENSLAFG00000011345
ATGGTCAACCCCACCGTGTACTTCGACATCGCCGTCGACGGCGAGCCCCTGGGCCGAGTCTCCTTCGAGTTGTTCGCAGA
TAAAGTTCCAAAGACAGCAGAAAACTTTCGCGCTCTGAGCACTGGTGAGAAAGGATTTGGTTACAAAGGCTCCTGCTTTC
ACAGAATTATTCCTGGGTTTATGTGCCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTATGGG
GAGAAATTTGATGATGAGAACTTCATCTTGAAACATACAGGTCCTGGCATCCTGTCCATGGCAAATGCTGGACCCAATAC
AAACGGTTCCCAGTTTTTTATCTGCACTGCTAAGACTGAATGGTTGGATGGAAAGCATGTAGTCTTTGGCAAAGTGAAAG
AAGGCATGAACATTGTGGAAGCCATGGAGCGCTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATTGCTGAC
TGTGGACAACTTAATTTGTTGTATATTTCATGTTTTATCTTAACAGACCATTCCTTCTGTAGCTCGGGAGACCACCCTTC
TTCCCCAGTGTGCTTGCAATATCCTATAATCGCTCTCACTGCAGTTCTTTGGGTTCTA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012003 possible_ortholog 12 retrogenes
retro_btau_1005, retro_btau_1448, retro_btau_155, retro_btau_1696, retro_btau_1806, retro_btau_272, retro_btau_334, retro_btau_335, retro_btau_345, retro_btau_414, retro_btau_751, retro_btau_934,
Callithrix jacchus ENSCJAG00000011969 ortholog_one2many 54 retrogenes
retro_cjac_1065, retro_cjac_1080, retro_cjac_1083, retro_cjac_1092, retro_cjac_1097, retro_cjac_11, retro_cjac_1193, retro_cjac_1213, retro_cjac_1310, retro_cjac_1326, retro_cjac_1347, retro_cjac_1451, retro_cjac_147, retro_cjac_1678, retro_cjac_1710, retro_cjac_1760, retro_cjac_1782, retro_cjac_1982, retro_cjac_1989, retro_cjac_2043, retro_cjac_2060, retro_cjac_2062, retro_cjac_2118, retro_cjac_2286, retro_cjac_2327, retro_cjac_2376, retro_cjac_2425, retro_cjac_2426, retro_cjac_2479, retro_cjac_2540, retro_cjac_2688, retro_cjac_2863, retro_cjac_2881, retro_cjac_2977, retro_cjac_3073, retro_cjac_3077, retro_cjac_3101, retro_cjac_3196, retro_cjac_384, retro_cjac_4202, retro_cjac_4203, retro_cjac_501, retro_cjac_646, retro_cjac_649, retro_cjac_695, retro_cjac_704, retro_cjac_710, retro_cjac_714, retro_cjac_717, retro_cjac_755, retro_cjac_827, retro_cjac_834, retro_cjac_871, retro_cjac_971,
Cavia porcellus ENSCPOG00000002632 ortholog_one2one 11 retrogenes
retro_cpor_1152, retro_cpor_1284, retro_cpor_1395, retro_cpor_1493, retro_cpor_165, retro_cpor_192, retro_cpor_251, retro_cpor_372, retro_cpor_642, retro_cpor_902, retro_cpor_960,
Echinops telfairi ENSETEG00000002186 possible_ortholog 21 retrogenes
retro_etel_115, retro_etel_1188, retro_etel_1292, retro_etel_1322, retro_etel_1670, retro_etel_1827, retro_etel_1875, retro_etel_1886, retro_etel_208, retro_etel_25, retro_etel_288, retro_etel_371, retro_etel_430, retro_etel_447, retro_etel_485, retro_etel_537, retro_etel_551, retro_etel_568, retro_etel_595, retro_etel_937, retro_etel_998,
Gorilla gorilla ENSGGOG00000026298 possible_ortholog 4 retrogenes
retro_ggor_138, retro_ggor_15, retro_ggor_165, retro_ggor_28,
Macropus eugenii ENSMEUG00000002016 possible_ortholog 20 retrogenes
retro_meug_1024, retro_meug_1055, retro_meug_1089, retro_meug_1133, retro_meug_1269, retro_meug_1391, retro_meug_1576, retro_meug_1746, retro_meug_1880, retro_meug_1975, retro_meug_2013, retro_meug_2037, retro_meug_260, retro_meug_297, retro_meug_301, retro_meug_437, retro_meug_478, retro_meug_510, retro_meug_713, retro_meug_73,
Macaca mulatta ENSMMUG00000016638 possible_ortholog 10 retrogenes
retro_mmul_1, retro_mmul_13, retro_mmul_132, retro_mmul_141, retro_mmul_161, retro_mmul_195, retro_mmul_245, retro_mmul_5, retro_mmul_56, retro_mmul_8,
Monodelphis domestica ENSMODG00000016089 possible_ortholog 9 retrogenes
retro_mdom_1373, retro_mdom_1524, retro_mdom_1856, retro_mdom_1884, retro_mdom_215, retro_mdom_272, retro_mdom_29, retro_mdom_730, retro_mdom_85,
Mus musculus ENSMUSG00000071866 possible_ortholog 2 retrogenes
retro_mmus_242, retro_mmus_285,
Oryctolagus cuniculus ENSOCUG00000016662 possible_ortholog 3 retrogenes
retro_ocun_113, retro_ocun_1406, retro_ocun_237,
Otolemur garnettii ENSOGAG00000027997 possible_ortholog 31 retrogenes
retro_ogar_1090, retro_ogar_1201, retro_ogar_1305, retro_ogar_1329, retro_ogar_1336, retro_ogar_1562, retro_ogar_1634, retro_ogar_1741, retro_ogar_1889, retro_ogar_1893, retro_ogar_1920, retro_ogar_1973, retro_ogar_1974, retro_ogar_1999, retro_ogar_21, retro_ogar_2246, retro_ogar_2265, retro_ogar_2397, retro_ogar_2401, retro_ogar_2440, retro_ogar_2484, retro_ogar_2794, retro_ogar_2907, retro_ogar_2924, retro_ogar_2938, retro_ogar_2948, retro_ogar_3072, retro_ogar_3187, retro_ogar_3210, retro_ogar_357, retro_ogar_743,
Pongo abelii ENSPPYG00000017586 possible_ortholog 12 retrogenes
retro_pabe_1065, retro_pabe_1330, retro_pabe_186, retro_pabe_221, retro_pabe_2267, retro_pabe_2469, retro_pabe_2633, retro_pabe_2730, retro_pabe_2812, retro_pabe_3474, retro_pabe_631, retro_pabe_995,
Pongo abelii ENSPPYG00000017587 possible_ortholog 4 retrogenes
retro_pabe_1118, retro_pabe_2202, retro_pabe_3311, retro_pabe_3602,
Rattus norvegicus ENSRNOG00000006423 possible_ortholog 2 retrogenes
retro_rnor_360, retro_rnor_387,
Sarcophilus harrisii ENSSHAG00000017062 possible_ortholog 3 retrogenes
retro_shar_164, retro_shar_383, retro_shar_750,
Ictidomys tridecemlineatus ENSSTOG00000010215 ortholog_one2one 10 retrogenes
retro_itri_1073, retro_itri_1576, retro_itri_1683, retro_itri_1897, retro_itri_499, retro_itri_667, retro_itri_7, retro_itri_731, retro_itri_802, retro_itri_978,
Tarsius syrichta ENSTSYG00000008973 possible_ortholog 23 retrogenes
retro_tsyr_1106, retro_tsyr_1266, retro_tsyr_1277, retro_tsyr_1530, retro_tsyr_1643, retro_tsyr_1816, retro_tsyr_1909, retro_tsyr_2040, retro_tsyr_2072, retro_tsyr_2097, retro_tsyr_388, retro_tsyr_400, retro_tsyr_408, retro_tsyr_430, retro_tsyr_459, retro_tsyr_478, retro_tsyr_481, retro_tsyr_507, retro_tsyr_641, retro_tsyr_705, retro_tsyr_760, retro_tsyr_847, retro_tsyr_924,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_483 78.33 56.80
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Download FASTA sequences of all ENSLAFG00000011345 retrocopies