Parental gene:

ENSTSYG00000008973

Aliases:None
Description:None
Organism:Tarsier (Tarsius syrichta)
Coordinates:scaffold_82691:5675..6863(+)


>ENSTSYG00000008973
CTGTTTGCAGACAAAGTTCCAAAGACAGCAGAAAACTTTCGTGCTCTGAGCACTGGAGAGAAAGGATTTGGTTATAAGGG
TTCCTGCTTTCACAGAATTATTCCAGGGTTTATGTGCCAGGGTGGTGACTTTACACGCCATAATGGCACTGGCGGCAAGT
CCATCTATGGGGAGAAATTTGATGATGAGAACTTCATCTTGAAGCATACAGGTCCCGGCATCTTGTCCATGGCAAATGCT
GGACCCAACACAAACGGTTCCCAGTTTTTCATCTGCACTACTAAGACTGAGTGGTTGGATGGCAAGCATGTGGTTTTTGG
CAAGGTGAAAGAGGGCATGAATGTTGTACAAGCCATGGAGGGCTTTGGGTCCAAGAATGGCAAGACCAGCAAGAAGATCA
CCATTGCTGACTGTGGACAACTCTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012003 possible_ortholog 12 retrogenes
Callithrix jacchus ENSCJAG00000011969 possible_ortholog 54 retrogenes
Cavia porcellus ENSCPOG00000002632 possible_ortholog 11 retrogenes
Echinops telfairi ENSETEG00000002186 ortholog_many2many 21 retrogenes
Homo sapiens ENSG00000196262 possible_ortholog 78 retrogenes
Gorilla gorilla ENSGGOG00000026298 possible_ortholog 4 retrogenes
Loxodonta africana ENSLAFG00000011345 possible_ortholog 1 retrogene
Macropus eugenii ENSMEUG00000002016 possible_ortholog 20 retrogenes
Macaca mulatta ENSMMUG00000016638 possible_ortholog 10 retrogenes
Monodelphis domestica ENSMODG00000016089 possible_ortholog 9 retrogenes
Mus musculus ENSMUSG00000071866 possible_ortholog 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000016662 possible_ortholog 3 retrogenes
Otolemur garnettii ENSOGAG00000027997 possible_ortholog 31 retrogenes
Pongo abelii ENSPPYG00000017586 possible_ortholog 12 retrogenes
Pongo abelii ENSPPYG00000017587 possible_ortholog 4 retrogenes
Pan troglodytes ENSPTRG00000023064 possible_ortholog 77 retrogenes
Rattus norvegicus ENSRNOG00000006423 possible_ortholog 2 retrogenes
Sarcophilus harrisii ENSSHAG00000017062 possible_ortholog 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000010215 possible_ortholog 10 retrogenes
Tupaia belangeri ENSTBEG00000017484 possible_ortholog 77 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_388 84.09 93.62
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2. retro_tsyr_400 91.30 97.16
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3. retro_tsyr_408 84.67 95.04
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4. retro_tsyr_430 77.04 95.04
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5. retro_tsyr_459 83.58 95.04
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6. retro_tsyr_478 83.97 92.20
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7. retro_tsyr_481 71.79 82.27
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8. retro_tsyr_507 76.98 97.87
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9. retro_tsyr_641 75.54 97.87
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10. retro_tsyr_705 89.47 80.85
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11. retro_tsyr_760 76.98 97.87
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12. retro_tsyr_847 76.26 97.87
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13. retro_tsyr_924 83.33 95.04
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14. retro_tsyr_1106 75.54 97.87
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15. retro_tsyr_1266 78.00 70.92
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16. retro_tsyr_1277 71.31 85.82
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17. retro_tsyr_1530 71.28 66.67
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18. retro_tsyr_1643 90.55 90.07
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19. retro_tsyr_1816 90.77 91.49
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20. retro_tsyr_1909 88.00 88.65
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21. retro_tsyr_2040 78.36 94.33
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22. retro_tsyr_2072 75.54 97.87
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23. retro_tsyr_2097 77.14 73.05
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Download FASTA sequences of all ENSTSYG00000008973 retrocopies