Parental gene:

Ppia, ENSRNOG00000006423

Aliases:Ppia, CYCA, CyP-A
Description:Peptidyl-prolyl cis-trans isomerase A [Source:UniProtKB/Swiss-Prot;Acc:P10111]
Organism:Rat (Rattus norvegicus)
Coordinates:14:80306922..80310652(+)


>ENSRNOG00000006423
ATGGTCAACCCCACCGTGTTCTTCGACATCACGGCTGATGGCGAGCCCTTGGGTCGCGTCTGCTTCGAGCTGTTTGCAGA
CAAAGTTCCAAAGACAGCAGAAAACTTTCGTGCTCTGAGCACTGGGGAGAAAGGATTTGGCTATAAGGGTTCCTCCTTTC
ACAGAATTATTCCAGGATTCATGTGCCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATCTACGGA
GAGAAATTTGAGGATGAGAACTTCATCCTGAAGCATACAGGTCCTGGCATCTTGTCCATGGCAAATGCTGGACCAAACAC
AAATGGTTCCCAGTTTTTTATCTGCACTGCCAAGACTGAGTGGCTGGATGGCAAGCATGTGGTCTTTGGGAAGGTGAAAG
AAGGCATGAGCATTGTGGAAGCCATGGAGCGTTTTGGGTCCAGGAATGGCAAGACCAGCAAGAAGATCACCATCTCCGAC
TGTGGACAACTCTAA

Library Parental gene expression (RPM)
SRP017611_liver 90 .17 RPM
SRP017611_kidney 182 .06 RPM
SRP017611_brain 206 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012003 possible_ortholog 12 retrogenes
Callithrix jacchus ENSCJAG00000011969 possible_ortholog 54 retrogenes
Cavia porcellus ENSCPOG00000002632 possible_ortholog 11 retrogenes
Echinops telfairi ENSETEG00000002186 possible_ortholog 21 retrogenes
Homo sapiens ENSG00000196262 ortholog_one2many 78 retrogenes
Gorilla gorilla ENSGGOG00000026298 ortholog_many2many 4 retrogenes
Loxodonta africana ENSLAFG00000011345 possible_ortholog 1 retrogene
Macropus eugenii ENSMEUG00000002016 possible_ortholog 20 retrogenes
Macaca mulatta ENSMMUG00000016638 ortholog_many2many 10 retrogenes
Monodelphis domestica ENSMODG00000016089 possible_ortholog 9 retrogenes
Mus musculus ENSMUSG00000071866 ortholog_many2many 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000016662 possible_ortholog 3 retrogenes
Otolemur garnettii ENSOGAG00000027997 possible_ortholog 31 retrogenes
Pongo abelii ENSPPYG00000017586 ortholog_many2many 12 retrogenes
Pongo abelii ENSPPYG00000017587 ortholog_many2many 4 retrogenes
Pan troglodytes ENSPTRG00000023064 ortholog_one2many 77 retrogenes
Sarcophilus harrisii ENSSHAG00000017062 possible_ortholog 3 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000010215 possible_ortholog 10 retrogenes
Tupaia belangeri ENSTBEG00000017484 ortholog_one2many 77 retrogenes
Tarsius syrichta ENSTSYG00000008973 possible_ortholog 23 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_360 100.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_rnor_387 86.59 100.00
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSRNOG00000006423 retrocopies