Parental gene: | LSM6, ENSMMUG00000005524 |
| Aliases: | None |
| Description: | U6 snRNA-associated Sm-like protein LSm6 [Source:RefSeq peptide;Acc:NP_001253894] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 5:138329516..138344273(+) |
>ENSMMUG00000005524
ATGAGTCTTCGGAAGCAAACCCCTAGTGACTTCTTAAAGCAAATCATCGGACGACCGGTTGTGGTAAAATTAAATTCTGG
AGTGGATTATCGAGGGGTCCTGGCTTGCTTGGATGGCTACATGAATATAGCCCTGGAGCAGACAGAAGAATATGTAAATG
GACAACTGAAGAATAAGTATGGGGATGCATTTATCCGAGGAAACAATGTGTTGTACATCAGTACACAGAAGAGACGGATG
TGA
ATGAGTCTTCGGAAGCAAACCCCTAGTGACTTCTTAAAGCAAATCATCGGACGACCGGTTGTGGTAAAATTAAATTCTGG
AGTGGATTATCGAGGGGTCCTGGCTTGCTTGGATGGCTACATGAATATAGCCCTGGAGCAGACAGAAGAATATGTAAATG
GACAACTGAAGAATAAGTATGGGGATGCATTTATCCGAGGAAACAATGTGTTGTACATCAGTACACAGAAGAGACGGATG
TGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .00 RPM |
| SRP007412_brain | 7 .17 RPM |
| SRP007412_cerebellum | 7 .62 RPM |
| SRP007412_heart | 10 .78 RPM |
| SRP007412_kidney | 7 .51 RPM |
| SRP007412_liver | 7 .88 RPM |
| SRP007412_testis | 10 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002482 | ortholog_one2one | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000009322 | ortholog_one2one | 5 retrogenes | |
| Microcebus murinus | ENSMICG00000000571 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009302 | within_species_paralog | 4 retrogenes | |
| Mus musculus | ENSMUSG00000031683 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000026665 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015105 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016488 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012759 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_668 | 69.88 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_991 | 66.67 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000005524 retrocopies