Parental gene: | SRSF3, ENSMMUG00000014306 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 4:36347671..36356665(+) |
>ENSMMUG00000014306
ATGCATCGTGATTCCTGTCCATTGGACTGTAAGGTTTATGTAGGCAATCTTGGAAACAATGGCAACAAGACCGAATTGGA
ACGGGCTTTTGGCTACTATGGACCACTCCGAAGTGTGTGGGTTGCTAGAAACCCACCCGGCTTTGCTTTTGTTGAATTTG
AAGATCCCCGAGATGCAGCTGATGCGGTCCGAGAGCTAGATGGAAGAACACTATGTGGCTGCCGTGTAAGAGTGGAACTG
TCGAATGGTGAAAAAAGAAGTAGAAATCGTGGCCCACCTCCCTCTTGGGGTCGTCGCCCTCGAGATGATTATCGTAGGAG
GAGTCCTCCACCTCGTCGCAGATCTCCACGAAGGAGAAGCTTCTCTCGCAGCCGAAGCAGGTCCCTTTCTAGAGATAGGA
GAAGAGAGAGATCTCTGTCTCGGGAGAGAAATCACAAGCCGTCCCGATCCTTCTCTAGGTCTCGTAGCCGATCTAGGTCA
AATGAAAGGAAATAG
ATGCATCGTGATTCCTGTCCATTGGACTGTAAGGTTTATGTAGGCAATCTTGGAAACAATGGCAACAAGACCGAATTGGA
ACGGGCTTTTGGCTACTATGGACCACTCCGAAGTGTGTGGGTTGCTAGAAACCCACCCGGCTTTGCTTTTGTTGAATTTG
AAGATCCCCGAGATGCAGCTGATGCGGTCCGAGAGCTAGATGGAAGAACACTATGTGGCTGCCGTGTAAGAGTGGAACTG
TCGAATGGTGAAAAAAGAAGTAGAAATCGTGGCCCACCTCCCTCTTGGGGTCGTCGCCCTCGAGATGATTATCGTAGGAG
GAGTCCTCCACCTCGTCGCAGATCTCCACGAAGGAGAAGCTTCTCTCGCAGCCGAAGCAGGTCCCTTTCTAGAGATAGGA
GAAGAGAGAGATCTCTGTCTCGGGAGAGAAATCACAAGCCGTCCCGATCCTTCTCTAGGTCTCGTAGCCGATCTAGGTCA
AATGAAAGGAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 61 .00 RPM |
| SRP007412_brain | 75 .63 RPM |
| SRP007412_cerebellum | 107 .84 RPM |
| SRP007412_heart | 91 .04 RPM |
| SRP007412_kidney | 86 .50 RPM |
| SRP007412_liver | 51 .10 RPM |
| SRP007412_testis | 140 .14 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016062 | possible_ortholog | 5 retrogenes | |
| Echinops telfairi | ENSETEG00000010117 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000018193 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000010671 | possible_ortholog | 6 retrogenes | |
| Macaca mulatta | ENSMMUG00000016494 | other_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000071172 | possible_ortholog | 9 retrogenes | |
| Otolemur garnettii | ENSOGAG00000000502 | possible_ortholog | 6 retrogenes | |
| Sus scrofa | ENSSSCG00000001564 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014280 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1007 | 83.44 | 92.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1042 | 86.16 | 96.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_1642 | 74.44 | 53.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_2359 | 58.00 | 60.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000014306 retrocopies